Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   M0D47_RS17260 Genome accession   NZ_CP096140
Coordinates   4057282..4057683 (+) Length   133 a.a.
NCBI ID   WP_005913706.1    Uniprot ID   A0AAI7ZH35
Organism   Xanthomonas prunicola strain MAI5037     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4052282..4062683
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M0D47_RS17240 (M0D47_17225) tsaB 4053517..4054236 (+) 720 WP_260807407.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -
  M0D47_RS17245 (M0D47_17230) - 4054233..4055147 (+) 915 WP_252162362.1 ADP-ribosylglycohydrolase family protein -
  M0D47_RS17250 (M0D47_17235) - 4055223..4056098 (-) 876 WP_101361769.1 energy transducer TonB -
  M0D47_RS17255 (M0D47_17240) gshB 4056095..4057045 (-) 951 WP_101361768.1 glutathione synthase -
  M0D47_RS17260 (M0D47_17245) pilG 4057282..4057683 (+) 402 WP_005913706.1 twitching motility response regulator PilG Regulator
  M0D47_RS17265 (M0D47_17250) - 4057701..4058063 (+) 363 WP_005913708.1 response regulator -
  M0D47_RS17270 (M0D47_17255) - 4058063..4058593 (+) 531 WP_003482487.1 chemotaxis protein CheW -
  M0D47_RS17275 (M0D47_17260) - 4058633..4060669 (+) 2037 WP_101361767.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14667.03 Da        Isoelectric Point: 6.9539

>NTDB_id=679643 M0D47_RS17260 WP_005913706.1 4057282..4057683(+) (pilG) [Xanthomonas prunicola strain MAI5037]
MSENIAAGGELAGLKVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKSTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLSAIRTYVHA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=679643 M0D47_RS17260 WP_005913706.1 4057282..4057683(+) (pilG) [Xanthomonas prunicola strain MAI5037]
ATGAGTGAAAACATTGCTGCGGGTGGGGAACTCGCAGGACTGAAGGTGATGGTCATCGATGATTCGAAGACCATTCGCCG
CACCGCCGAAACGCTGCTGAAGCGGGAAGGTTGTGAAGTAGTGACAGCAACGGATGGTTTCGAGGCACTGGCCAAAATTG
CGGACCAGCAACCTCAGATCATTTTTGTCGACATCATGATGCCGCGCCTGGATGGGTACCAGACGTGCGCGTTGATCAAG
GGCAACCAGCTCTTCAAATCGACGCCGGTGATCATGTTGTCGTCCAAGGATGGCCTGTTCGACAAGGCACGCGGCCGCAT
CGTCGGTTCCGAGCAATATCTGACCAAGCCGTTCACCCGTGAAGAACTACTGAGCGCGATCCGCACGTACGTCCACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.207

90.977

0.684