Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA/comEC   Type   Machinery gene
Locus tag   MZO21_RS15105 Genome accession   NZ_CP096120
Coordinates   1683967..1685394 (-) Length   475 a.a.
NCBI ID   WP_282455472.1    Uniprot ID   -
Organism   Acinetobacter portensis strain JNE5     
Function   ssDNA transport through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1678967..1690394
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MZO21_RS08455 (MZO21_08455) purM 1679327..1680397 (+) 1071 WP_154772741.1 phosphoribosylformylglycinamidine cyclo-ligase -
  MZO21_RS08460 (MZO21_08460) purN 1680408..1681037 (+) 630 WP_154772740.1 phosphoribosylglycinamide formyltransferase -
  MZO21_RS08465 (MZO21_08465) - 1681090..1681890 (-) 801 WP_154772739.1 alpha/beta hydrolase -
  MZO21_RS08470 (MZO21_08470) sppA 1681887..1682900 (-) 1014 WP_154772738.1 signal peptide peptidase SppA -
  MZO21_RS08475 (MZO21_08475) - 1683036..1683977 (+) 942 WP_154772737.1 lysophospholipid acyltransferase family protein -
  MZO21_RS15105 comA/comEC 1683967..1685394 (-) 1428 WP_282455472.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  MZO21_RS15110 - 1685424..1686314 (-) 891 WP_282441541.1 ComEC/Rec2 family competence protein -
  MZO21_RS08485 (MZO21_08485) - 1686399..1687082 (-) 684 WP_154772735.1 ABC transporter ATP-binding protein -
  MZO21_RS08490 (MZO21_08490) - 1687075..1688310 (-) 1236 WP_154772734.1 lipoprotein-releasing ABC transporter permease subunit -
  MZO21_RS08495 (MZO21_08495) - 1688334..1688906 (+) 573 WP_154772733.1 PilZ domain-containing protein -
  MZO21_RS08500 (MZO21_08500) - 1688908..1689816 (-) 909 WP_171501274.1 EamA family transporter -
  MZO21_RS08505 (MZO21_08505) - 1689826..1690293 (-) 468 WP_171501273.1 YaiI/YqxD family protein -

Sequence

Protein


Download         Length: 475 a.a.        Molecular weight: 54745.87 Da        Isoelectric Point: 6.4260

>NTDB_id=679588 MZO21_RS15105 WP_282455472.1 1683967..1685394(-) (comA/comEC) [Acinetobacter portensis strain JNE5]
MWILFKYPIKALSLLLLSASLLLIFDPFSILSAAFWLSYGACFVLLRIYQTIQEQNFEQQSLIQKSISALKILVESQWKI
FIALFPLMIIFFKQIAWITPLSNLFAIPFIGLVIVPLDVLAGMSYFLFEPLSQLFFQINNLCIGLLLFMMESIDQIFHPQ
LIPVAMNFWSMICIILSLIILFSPQGLMPKAWAGICLFPLLWSDNKNYLFELSVLDVGQGQSIFIRSENKTLMVDTGGYY
DETKFSVGQQIIQPFLSVNGVRTIDYLFLTHLDQDHSGAFDYLKNKVKFEQVYSNEKVEVLPNSKFEYCKKGQNFNINHH
VKIEVLSPKEEQLDLAKYNKNENSCVLYVQVLNAKKYQNYLLMGDAGWETEYAILQDYPHLKVDVLVLGHHGSQHSSSYA
FLEKLQPEIAIVSAGFNNRYGHPSEIVQARLKELNIPLLSTINNGTIQFLQHQNNDLEINKQRDTRLWLKRDFSD

Nucleotide


Download         Length: 1428 bp        

>NTDB_id=679588 MZO21_RS15105 WP_282455472.1 1683967..1685394(-) (comA/comEC) [Acinetobacter portensis strain JNE5]
GTGTGGATTTTATTTAAATATCCAATTAAAGCTTTAAGCTTGTTATTGTTAAGTGCTTCGTTATTATTAATATTTGATCC
TTTCAGTATTTTATCAGCCGCATTTTGGTTGTCCTATGGCGCATGCTTTGTACTTTTAAGAATCTATCAAACGATACAAG
AACAGAATTTCGAACAGCAATCTTTAATACAAAAGAGCATAAGTGCGCTTAAAATTTTAGTGGAATCTCAGTGGAAAATA
TTTATCGCATTATTTCCACTCATGATTATTTTCTTTAAACAAATCGCTTGGATTACGCCACTAAGCAACCTTTTCGCAAT
TCCATTTATTGGTTTGGTTATTGTGCCTTTAGATGTTTTAGCGGGGATGAGTTACTTTTTATTCGAACCATTAAGTCAGC
TTTTTTTTCAAATAAATAATCTTTGTATTGGTTTGCTGCTGTTTATGATGGAAAGTATTGATCAAATTTTTCATCCACAA
TTAATACCTGTTGCTATGAATTTTTGGAGCATGATTTGTATTATTTTATCGCTGATTATTCTATTTTCACCACAGGGGCT
TATGCCAAAAGCATGGGCAGGAATTTGTTTATTTCCACTGCTTTGGAGTGACAATAAAAATTATCTATTTGAGCTTTCAG
TATTAGATGTAGGGCAAGGGCAATCTATTTTTATTCGTAGTGAAAACAAAACTTTAATGGTAGATACAGGTGGATATTAT
GATGAAACTAAATTTAGCGTAGGTCAGCAGATTATTCAGCCATTTTTATCTGTAAATGGGGTGAGAACAATAGATTATTT
GTTTTTAACACACTTGGATCAAGATCATAGTGGTGCATTTGATTATTTGAAAAACAAGGTGAAATTTGAGCAAGTTTATT
CAAATGAGAAAGTAGAAGTATTGCCAAATTCAAAATTTGAATATTGTAAGAAAGGTCAAAACTTTAATATTAATCATCAT
GTAAAAATTGAAGTTCTTTCGCCTAAAGAAGAACAATTAGATTTGGCAAAATACAATAAAAATGAAAATTCCTGTGTGTT
ATATGTTCAAGTTTTGAATGCAAAAAAATATCAAAACTATTTACTAATGGGCGATGCAGGCTGGGAAACAGAATATGCAA
TTTTACAGGATTATCCACATTTAAAAGTAGATGTTCTTGTGCTTGGGCATCACGGTAGTCAACATAGTTCTTCTTATGCT
TTTTTAGAAAAACTACAGCCGGAAATTGCGATTGTTTCAGCAGGTTTTAATAACCGTTATGGTCATCCAAGTGAAATTGT
ACAAGCACGCTTGAAAGAATTAAATATACCATTACTAAGTACAATTAATAATGGAACTATCCAGTTTTTACAGCATCAAA
ATAACGATTTAGAAATCAATAAACAGCGAGATACAAGACTATGGCTAAAAAGAGATTTTAGTGATTAA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(216-303)

Competence protein (Competence)

(3-183)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA/comEC Acinetobacter baumannii strain A118

48.326

100

0.486
  comA/comEC Acinetobacter baumannii D1279779

48.326

100

0.486
  comA/comEC Acinetobacter baylyi ADP1

49.552

93.895

0.465