Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilS   Type   Regulator
Locus tag   MZO21_RS11655 Genome accession   NZ_CP096120
Coordinates   2341793..2343361 (+) Length   522 a.a.
NCBI ID   WP_248102334.1    Uniprot ID   -
Organism   Acinetobacter portensis strain JNE5     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2336793..2348361
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MZO21_RS11635 (MZO21_11630) - 2337249..2338553 (+) 1305 WP_171501188.1 homoserine dehydrogenase -
  MZO21_RS11640 (MZO21_11635) thrC 2338610..2339749 (+) 1140 WP_154771939.1 threonine synthase -
  MZO21_RS11645 (MZO21_11640) - 2339855..2340913 (-) 1059 WP_171501187.1 serine hydrolase -
  MZO21_RS11650 (MZO21_11645) - 2341131..2341766 (+) 636 WP_171501186.1 response regulator -
  MZO21_RS11655 (MZO21_11650) pilS 2341793..2343361 (+) 1569 WP_248102334.1 ATP-binding protein Regulator
  MZO21_RS11660 (MZO21_11655) pilR 2343434..2344789 (+) 1356 WP_248102339.1 sigma 54-interacting transcriptional regulator Regulator
  MZO21_RS11665 (MZO21_11660) - 2344790..2345962 (-) 1173 WP_248102331.1 S41 family peptidase -
  MZO21_RS11670 (MZO21_11665) gpmI 2345984..2347528 (-) 1545 WP_154771934.1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase -

Sequence

Protein


Download         Length: 522 a.a.        Molecular weight: 59719.99 Da        Isoelectric Point: 6.8117

>NTDB_id=679581 MZO21_RS11655 WP_248102334.1 2341793..2343361(+) (pilS) [Acinetobacter portensis strain JNE5]
MYSNYSNSEHNRYRLGLWYGTYRLIIALCLFFVFFLTYQNLQHDYGHPLLYLSSVSIYIFLSLAQLVFYKFYSFHIVRQI
TLFFAIDVILFSALTFASDGPSLHISLLFAIAIFAASLLLEAKKALFITLVAVISVVYQQFLSGLFSLASLNNLSISALL
AILFIVVYIIGQLTIRRFQVLENWSFTQSLEINKLQNINRYILEQIETGYLVLDENCHIALSNPAARELLGISPLYTIDP
FPLYKAQPDLFEILKFDQLKDGEKFEFESQQSNSHIHVKVQKLIVPHQTLTLLVLQDSKRINQHAQQLKLASLGQLSASI
AHEIRNPLATIVQANNLLEGSDDLQQKQLIKMVNKQAQRIDKIIHDTLSMVKNNETHTSTIHLNTFIPAFIQDNLLDIAD
KIQVNIEASSFINFDESQIQQVLINLIRNAIRHNNKDRSHIELNIYSHESYIRLDVIDFGEGISHENIRSLFQPFFSTEI
TGTGLGLYLSHSFCEANQAKLSYVEKQCGACFRIECPRIVIN

Nucleotide


Download         Length: 1569 bp        

>NTDB_id=679581 MZO21_RS11655 WP_248102334.1 2341793..2343361(+) (pilS) [Acinetobacter portensis strain JNE5]
ATGTATTCTAATTACAGTAATTCTGAGCACAACAGATACAGATTGGGGTTATGGTATGGAACATACCGCCTCATCATTGC
ACTTTGTTTATTCTTCGTTTTCTTTTTGACTTATCAGAACCTACAGCATGACTATGGTCATCCCTTACTGTATTTGTCAT
CTGTTAGCATTTACATTTTTTTAAGCCTTGCACAATTAGTCTTCTATAAATTTTATTCATTTCATATTGTTCGACAAATC
ACATTATTTTTCGCTATAGATGTCATACTTTTTAGCGCACTTACATTTGCTTCAGATGGCCCAAGTCTACATATCAGCTT
ATTATTCGCAATTGCCATCTTTGCCGCATCTTTACTTTTAGAAGCCAAAAAAGCACTATTTATTACACTTGTCGCTGTTA
TTAGTGTCGTGTATCAGCAGTTTTTAAGTGGGCTTTTTTCTCTAGCCTCTCTAAATAATTTGAGTATTAGCGCACTTCTT
GCAATTTTATTTATTGTTGTCTACATTATTGGGCAACTTACGATCCGTCGATTTCAAGTACTTGAAAATTGGAGTTTTAC
TCAATCTTTAGAGATTAACAAACTACAAAATATTAACCGCTATATTCTCGAACAAATTGAAACCGGCTACTTAGTTTTAG
ATGAAAATTGTCATATTGCTCTAAGCAACCCCGCGGCTCGTGAATTACTTGGTATTAGTCCACTCTATACCATTGATCCA
TTTCCACTTTATAAAGCACAACCAGATTTGTTTGAAATTTTAAAATTTGATCAGCTTAAAGATGGCGAAAAATTCGAATT
TGAATCGCAACAAAGTAATTCACATATTCACGTAAAGGTTCAAAAATTAATTGTACCTCACCAAACACTAACTCTCTTAG
TGCTACAAGATTCAAAACGAATCAATCAACATGCACAGCAACTTAAACTTGCATCTCTAGGGCAACTATCTGCAAGTATT
GCCCATGAAATTCGTAATCCTCTTGCAACCATTGTCCAAGCAAATAATCTTCTCGAGGGCAGCGACGATCTTCAACAAAA
GCAACTCATAAAAATGGTGAACAAACAGGCTCAACGGATAGATAAAATTATTCATGACACTTTAAGCATGGTCAAAAACA
ACGAAACACATACTTCAACCATTCATTTAAATACTTTTATACCTGCATTTATTCAAGATAATTTGCTTGATATTGCAGAT
AAAATTCAAGTGAATATAGAAGCATCTTCATTTATTAATTTTGATGAATCACAAATTCAACAAGTGCTTATTAATCTTAT
TCGAAATGCAATACGACACAATAATAAAGACAGAAGCCATATAGAATTAAATATTTATAGCCATGAGAGCTATATCAGAC
TTGATGTAATTGATTTTGGTGAAGGTATTTCGCATGAAAATATTCGCTCGCTATTTCAACCATTTTTTAGTACCGAAATC
ACAGGAACTGGTTTAGGATTATACTTATCGCATAGTTTTTGTGAGGCAAACCAAGCTAAACTGAGTTATGTAGAAAAACA
ATGTGGGGCATGCTTTAGAATTGAATGCCCCCGTATAGTAATAAATTAG

Domains

Predicted by InterproScan.

His Kinase A (phospho-acceptor) domain (HisKA)

(312-373)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(415-516)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilS Acinetobacter baumannii strain A118

55.34

98.659

0.546