Detailed information    

insolico Bioinformatically predicted

Overview

Name   priA   Type   Machinery gene
Locus tag   MZO21_RS11040 Genome accession   NZ_CP096120
Coordinates   2211051..2213273 (+) Length   740 a.a.
NCBI ID   WP_248101905.1    Uniprot ID   -
Organism   Acinetobacter portensis strain JNE5     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2206051..2218273
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MZO21_RS11015 (MZO21_11010) tusA 2206754..2207011 (-) 258 WP_154772042.1 sulfurtransferase TusA -
  MZO21_RS11020 (MZO21_11015) - 2207207..2208046 (+) 840 WP_154772041.1 transporter associated domain-containing protein -
  MZO21_RS11025 (MZO21_11020) lnt 2208043..2209602 (+) 1560 WP_248101901.1 apolipoprotein N-acyltransferase -
  MZO21_RS11030 (MZO21_11025) - 2209669..2210004 (-) 336 WP_154772039.1 hypothetical protein -
  MZO21_RS11035 (MZO21_11030) - 2210610..2210819 (+) 210 WP_154772038.1 cold-shock protein -
  MZO21_RS11040 (MZO21_11035) priA 2211051..2213273 (+) 2223 WP_248101905.1 primosomal protein N' Machinery gene
  MZO21_RS11045 (MZO21_11040) - 2213312..2215153 (+) 1842 WP_154772036.1 monovalent cation:proton antiporter-2 (CPA2) family protein -
  MZO21_RS11050 (MZO21_11045) - 2215204..2216079 (+) 876 WP_248101909.1 Hsp33 family molecular chaperone HslO -
  MZO21_RS11055 (MZO21_11050) - 2216284..2216745 (+) 462 WP_154772034.1 DUF2147 domain-containing protein -
  MZO21_RS11060 (MZO21_11055) - 2217001..2217264 (+) 264 WP_154772033.1 DUF465 domain-containing protein -
  MZO21_RS11065 (MZO21_11060) - 2217489..2217713 (+) 225 WP_154772032.1 DUF465 domain-containing protein -
  MZO21_RS11070 (MZO21_11065) - 2217789..2218145 (-) 357 Protein_2135 S1 RNA-binding domain-containing protein -

Sequence

Protein


Download         Length: 740 a.a.        Molecular weight: 83801.92 Da        Isoelectric Point: 8.4553

>NTDB_id=679576 MZO21_RS11040 WP_248101905.1 2211051..2213273(+) (priA) [Acinetobacter portensis strain JNE5]
MQNVYSNSSGTHRIRVAVPVYLYDCFDYMLSPEQYQQVEVGARVLVSFGRQNLVGIVMEKLPLDAPIDPAFKLKAITELL
DDRAILDTNVLKLLTWSAQYYQFPIGEVMQAALPTLLRQGKPADILARVWNLLDLDAESKLKRSEKQQEAYKILKLHPVG
TTESVLNLAGIETSTLKALEKKQICECILEKQDLSPVPVSMAQMPLTANPDQKNAIDTVLKYQNKYQAFLLDGLTGSGKT
EVYLQIMQEVLKKGQQVLVLVPEIGLTPQTVSRFQSRFHCNIALLHSGLNDTKRLQAWQHAQAGKASIILGTRSAIYTPL
PNLGLIILDEEHDLSFKQQEGFRYHARDVALYRAHLESCPIILGSATPSIDSYALVDQGKMKKLELNQRAGSAIMPKIHV
LDLKIAQKQHGISQALIQEIQKRLEKKEQVLIFLNRRGYAPVLICDSCAWQAKCPNCDANFTLHNKPYLHLHCHHCGTIH
RKPDQCPQCNHTELKPIGMGTAKVEDHLNELFPDFDVIRVDRDSTSRVGSWQKIYDRIQTSEPVILLGTQMLAKGHHFPY
VTLVAILDIDSGLLSVDFRAPERTAQLIVQVAGRAGRGERKGDVYLQTLRPDHPLLNTLVKEDYRQFAQQTLAERKMALL
PPARYSALIRCESKSQDINQDFLKQHAQLLRDNSENLIDIWGPIPAPMERKAGRFQAHMVLLSTDRARLHFYIRQWWQNM
LQQKPSGMKLSLDIDPQELS

Nucleotide


Download         Length: 2223 bp        

>NTDB_id=679576 MZO21_RS11040 WP_248101905.1 2211051..2213273(+) (priA) [Acinetobacter portensis strain JNE5]
ATGCAAAATGTCTATTCAAACAGTTCAGGCACTCATCGTATTCGCGTTGCTGTCCCTGTTTATTTATACGATTGTTTTGA
CTACATGCTCAGTCCTGAACAGTATCAACAAGTTGAAGTTGGAGCGCGTGTTTTAGTTTCATTCGGGCGTCAAAACTTAG
TTGGTATTGTGATGGAAAAACTTCCATTAGATGCACCTATTGATCCTGCTTTTAAACTCAAAGCAATTACAGAATTATTA
GATGATCGTGCAATCTTAGATACAAATGTTTTAAAGCTACTCACTTGGTCTGCACAGTATTATCAATTTCCAATTGGTGA
AGTAATGCAAGCCGCATTACCAACTTTACTTCGCCAAGGTAAGCCTGCCGATATTCTTGCAAGAGTCTGGAATTTATTAG
ATTTAGATGCTGAGAGTAAACTTAAACGCTCCGAGAAGCAGCAAGAAGCTTATAAAATTTTAAAACTTCATCCTGTTGGA
ACAACTGAGAGTGTTCTAAACTTAGCAGGAATTGAAACAAGTACTTTAAAAGCATTAGAAAAAAAACAAATTTGCGAATG
TATTTTAGAGAAACAAGATTTATCTCCTGTACCTGTAAGTATGGCTCAAATGCCATTAACAGCAAATCCTGATCAAAAAA
ATGCGATAGATACTGTTTTAAAATATCAAAATAAATATCAAGCTTTTTTACTCGATGGATTAACAGGCAGTGGTAAAACT
GAAGTTTATTTGCAAATCATGCAGGAAGTATTAAAAAAAGGGCAACAAGTTTTAGTCCTTGTACCTGAAATTGGACTCAC
ACCACAAACTGTTAGCCGTTTCCAATCTCGCTTTCATTGCAATATTGCCCTACTACATTCTGGCTTAAATGACACCAAAC
GCTTACAAGCATGGCAACATGCTCAAGCAGGAAAAGCATCTATTATTTTGGGAACGCGTTCTGCAATTTACACCCCGCTT
CCTAATTTAGGCTTAATTATTTTAGATGAAGAACATGATCTTTCATTTAAACAACAAGAAGGTTTCCGCTACCACGCACG
TGATGTCGCTTTATACCGTGCCCATTTAGAAAGTTGCCCTATTATATTAGGCTCAGCAACACCAAGTATTGATAGTTATG
CTTTGGTTGATCAAGGCAAAATGAAAAAGTTAGAGCTGAACCAACGTGCAGGTTCGGCTATCATGCCTAAAATTCATGTG
CTCGATTTAAAAATCGCTCAAAAACAGCATGGTATTAGCCAAGCTTTAATTCAAGAAATACAAAAAAGATTAGAAAAAAA
AGAACAAGTTTTAATTTTTCTAAATCGTCGTGGTTATGCACCCGTGCTTATTTGCGATAGTTGTGCTTGGCAAGCTAAAT
GCCCAAATTGCGATGCTAATTTCACTTTACACAATAAGCCTTATCTACATTTACACTGTCATCATTGTGGAACAATTCAT
AGAAAACCCGACCAATGTCCGCAATGTAATCACACAGAATTAAAACCTATTGGCATGGGAACAGCAAAAGTTGAAGATCA
CTTAAATGAATTATTCCCTGACTTTGACGTGATTCGAGTAGATCGCGACTCTACAAGTCGTGTTGGAAGTTGGCAGAAAA
TTTATGATCGCATTCAAACCAGTGAACCTGTCATTTTATTGGGCACACAAATGCTCGCAAAAGGACACCACTTCCCTTAT
GTCACTTTGGTTGCCATTTTAGATATAGATTCAGGCTTATTAAGTGTAGATTTCCGTGCACCTGAACGTACAGCACAACT
GATTGTTCAGGTTGCAGGTCGTGCGGGTCGTGGAGAACGTAAAGGTGATGTTTATTTACAAACATTACGTCCAGATCATC
CTTTATTAAATACTTTAGTTAAGGAAGATTACCGCCAATTTGCACAGCAAACTTTAGCTGAACGAAAAATGGCTTTACTC
CCTCCTGCTCGTTACTCAGCACTTATTCGCTGTGAATCAAAAAGCCAAGATATTAATCAAGACTTCCTCAAACAGCACGC
TCAATTACTACGTGATAACTCAGAAAACCTAATTGATATTTGGGGCCCAATTCCTGCTCCAATGGAAAGAAAAGCGGGCC
GCTTTCAAGCACATATGGTTTTGTTATCGACAGATAGAGCCAGATTACATTTTTATATTCGCCAATGGTGGCAAAACATG
TTGCAACAAAAGCCATCTGGCATGAAACTAAGCTTAGATATAGACCCTCAAGAACTCAGCTAA

Domains

Predicted by InterproScan.

Type III restriction enzyme, res subunit (ResIII)

(209-369)

Primosomal protein N C-terminal domain (PriA_C)

(645-736)

3DNA-binding domain (3BD) (PriA_3primeBD)

(15-114)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

71.117

99.189

0.705