Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilN   Type   Machinery gene
Locus tag   MZN68_RS00490 Genome accession   NZ_CP096117
Coordinates   107643..108242 (-) Length   199 a.a.
NCBI ID   WP_002214520.1    Uniprot ID   Q4W563
Organism   Neisseria meningitidis strain DFS-1910310016     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 102643..113242
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MZN68_RS00470 (MZN68_00480) - 102690..103202 (-) 513 WP_002214526.1 shikimate kinase -
  MZN68_RS00475 (MZN68_00485) pilQ 104104..106413 (-) 2310 WP_002221480.1 type IV pilus secretin PilQ Machinery gene
  MZN68_RS00480 (MZN68_00490) pilP 106432..106977 (-) 546 WP_002214522.1 pilus assembly protein PilP Machinery gene
  MZN68_RS00485 (MZN68_00495) - 106995..107642 (-) 648 WP_002217908.1 type 4a pilus biogenesis protein PilO -
  MZN68_RS00490 (MZN68_00500) pilN 107643..108242 (-) 600 WP_002214520.1 PilN domain-containing protein Machinery gene
  MZN68_RS00495 (MZN68_00505) pilM 108245..109360 (-) 1116 WP_002246701.1 type IV pilus biogenesis protein PilM -
  MZN68_RS00500 (MZN68_00510) - 109512..111908 (+) 2397 WP_002219786.1 penicillin-binding protein 1A -
  MZN68_RS00505 (MZN68_00515) yihA 112029..112658 (-) 630 WP_002222977.1 ribosome biogenesis GTP-binding protein YihA/YsxC -

Sequence

Protein


Download         Length: 199 a.a.        Molecular weight: 22257.48 Da        Isoelectric Point: 9.5493

>NTDB_id=679485 MZN68_RS00490 WP_002214520.1 107643..108242(-) (pilN) [Neisseria meningitidis strain DFS-1910310016]
MNNLIKINLLPYREEMNKRKQQQFKTLMYGAVLTGVAAVAATYLFIDNMINNQSERNTLLETSIAHLDTELSEIQKLKQE
KDAFLIKKNKIEELQLKRLQAAKILDSLNEAVPGSTYLTSLDAVTADSYRLSGRTSSDNRVAAMMRAMPNTGIFKQPELL
SIKKNNSHQEFTLQATLQPIVKAAESKENPASGNAQEAN

Nucleotide


Download         Length: 600 bp        

>NTDB_id=679485 MZN68_RS00490 WP_002214520.1 107643..108242(-) (pilN) [Neisseria meningitidis strain DFS-1910310016]
ATGAACAATTTAATCAAAATCAACCTCCTCCCCTACAGGGAAGAGATGAACAAGCGCAAACAGCAGCAGTTTAAAACGCT
GATGTACGGTGCCGTGCTGACGGGCGTTGCCGCCGTTGCGGCAACCTACCTGTTTATCGACAATATGATCAATAACCAGT
CGGAAAGAAACACGCTGCTGGAAACCTCCATCGCACACTTGGATACCGAGCTGTCGGAAATACAAAAGCTCAAACAGGAA
AAAGATGCCTTCCTGATTAAGAAAAACAAAATCGAGGAGCTCCAGCTCAAACGCCTCCAAGCCGCAAAAATCCTCGACAG
CCTGAATGAGGCCGTCCCCGGAAGCACCTACCTGACCTCGCTGGATGCCGTTACCGCCGACTCTTATCGGCTCAGCGGCA
GGACATCCAGCGACAACCGCGTTGCCGCCATGATGAGGGCGATGCCCAATACCGGCATATTCAAGCAACCCGAATTGTTA
AGCATCAAGAAAAACAATTCGCATCAAGAATTTACCCTTCAGGCAACATTACAACCCATCGTAAAGGCGGCCGAATCCAA
AGAGAATCCGGCTTCGGGAAACGCACAGGAGGCAAACTGA

Domains

Predicted by InterproScan.

Fimbrial assembly protein (PilN) (PilN)

(104-177)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q4W563

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilN Neisseria meningitidis strain C311

100

100

1