Detailed information    

insolico Bioinformatically predicted

Overview


Name   lqsT   Type   Regulator
Locus tag   MZN67_RS12690 Genome accession   NZ_CP096116
Coordinates   2833143..2834405 (+) Length   420 a.a.
NCBI ID   WP_038839484.1    Uniprot ID   -
Organism   Legionella pneumophila subsp. pneumophila strain DFS-2111020037     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 2828143..2839405
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MZN67_RS12680 (MZN67_12645) ceg32 2829031..2831859 (+) 2829 WP_038839483.1 Dot/Icm T4SS effector Ceg32/SidI -
  MZN67_RS12685 (MZN67_12650) mesI 2831861..2832748 (+) 888 WP_072402290.1 Dot/Icm T4SS metaeffector MesI -
  MZN67_RS12690 (MZN67_12655) lqsT 2833143..2834405 (+) 1263 WP_038839484.1 HAMP domain-containing sensor histidine kinase Regulator
  MZN67_RS12695 (MZN67_12660) - 2834453..2835148 (-) 696 WP_010948209.1 iron-containing redox enzyme family protein -
  MZN67_RS12700 (MZN67_12665) sdjA 2835545..2837968 (-) 2424 WP_374152053.1 Dot/Icm T4SS effector SdjA -
  MZN67_RS12705 (MZN67_12670) dupB 2838039..2839232 (-) 1194 WP_080020750.1 Dot/Icm T4SS effector deubiquitinase DupB/LaiF -

Sequence


Protein


Download         Length: 420 a.a.        Molecular weight: 48629.01 Da        Isoelectric Point: 7.9744

>NTDB_id=679475 MZN67_RS12690 WP_038839484.1 2833143..2834405(+) (lqsT) [Legionella pneumophila subsp. pneumophila strain DFS-2111020037]
MQRLKNIFTAIYQYLLKETEDASHQITLFGIVMMINYPLFGVFWKLEHFQLTEEFILRITAALLCACLAFNQFWPRQLLK
FLPVFWYIVLLFCLPYFFAYLTLINNGSTLWLMNCVSAIFFLLLVSSVLGALVLLVSGVGLAFFHFYILSNNQFVYIPGT
ISLFSLIVTFIAAIIIGALFARDREITYAGRLSGMRMLAGSIAHDLRTPLASIYLQAELQELIVERLNNPEVQKDLKENL
SKITRGIEMSNQLIRMQLNNIQRDKLDTSTFSIYSIKKLLKASLEEYPFKENQKSLIHLNDKNDFSIWIDEVGFKNMMWN
LLKNSLEYIEETHKGEISIWLEQGWEKENFNYLHIKDTAKGLNHKEYEKIFDFFYSGRKEGTGLGLAYCKLLMQAAGGDI
SCKGKKNEFAHFTLKFPKID

Nucleotide


Download         Length: 1263 bp        

>NTDB_id=679475 MZN67_RS12690 WP_038839484.1 2833143..2834405(+) (lqsT) [Legionella pneumophila subsp. pneumophila strain DFS-2111020037]
ATGCAAAGGTTAAAAAATATATTTACTGCAATTTACCAATATTTATTAAAAGAAACTGAAGATGCAAGCCACCAAATCAC
TTTATTTGGCATCGTCATGATGATTAACTACCCTCTTTTCGGAGTTTTCTGGAAACTGGAGCATTTTCAACTGACAGAAG
AATTTATTTTACGCATCACTGCAGCCCTCCTCTGTGCCTGTTTGGCATTTAATCAATTTTGGCCAAGACAATTATTAAAA
TTTCTACCTGTTTTTTGGTATATAGTTCTTCTCTTTTGTTTACCTTACTTTTTTGCTTATTTGACTCTCATAAACAATGG
CTCGACTCTTTGGCTAATGAATTGCGTATCCGCTATCTTTTTTCTTTTATTAGTTTCCAGTGTGTTGGGAGCTCTTGTAT
TGCTTGTATCAGGTGTTGGACTTGCTTTTTTTCATTTTTATATTTTGTCAAATAATCAGTTTGTCTATATCCCAGGAACC
ATATCACTTTTTAGTTTAATTGTTACGTTTATTGCAGCAATAATCATTGGTGCTTTGTTTGCACGAGATAGAGAAATTAC
CTATGCCGGACGTTTATCGGGTATGCGCATGCTGGCTGGAAGTATCGCTCATGATTTAAGAACGCCGCTTGCCAGTATTT
ATTTACAAGCCGAATTACAGGAATTGATTGTCGAAAGATTAAATAATCCAGAAGTTCAAAAGGACCTGAAGGAAAATTTA
AGCAAAATTACTCGCGGTATAGAAATGAGTAATCAATTAATTCGTATGCAATTAAATAATATTCAACGAGACAAATTAGA
TACCAGTACATTTTCGATTTATTCCATCAAAAAATTACTCAAGGCGTCTTTAGAAGAATACCCTTTCAAAGAAAATCAAA
AATCATTGATTCATTTAAATGATAAAAATGATTTTTCCATATGGATTGATGAAGTGGGTTTTAAAAATATGATGTGGAAT
TTGCTAAAAAATAGTCTGGAATATATTGAGGAAACCCATAAAGGCGAAATCTCTATCTGGCTAGAACAAGGATGGGAGAA
AGAGAATTTTAATTACCTCCATATAAAAGATACAGCTAAAGGTTTAAATCATAAAGAATATGAAAAAATATTTGATTTCT
TCTATTCTGGCAGAAAAGAAGGAACTGGTTTAGGCTTGGCCTATTGTAAACTTCTGATGCAAGCAGCAGGTGGTGATATT
TCCTGTAAAGGGAAAAAAAATGAATTCGCTCATTTCACTTTAAAATTCCCCAAAATTGATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  lqsT Legionella pneumophila subsp. pneumophila str. Philadelphia 1

99.524

100

0.995