Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   OG627_RS07480 Genome accession   NZ_CP109599
Coordinates   1825872..1826657 (+) Length   261 a.a.
NCBI ID   WP_114625277.1    Uniprot ID   A0A370B3D5
Organism   Streptomyces sp. NBC_01429     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1820872..1831657
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG627_RS07465 (OG627_07470) - 1821160..1821678 (+) 519 WP_329062686.1 TerD family protein -
  OG627_RS07470 (OG627_07475) - 1821828..1824707 (-) 2880 WP_329062688.1 vitamin B12-dependent ribonucleotide reductase -
  OG627_RS07475 (OG627_07480) nrdR 1824856..1825365 (-) 510 WP_329062689.1 transcriptional regulator NrdR -
  OG627_RS07480 (OG627_07485) dinR/lexA 1825872..1826657 (+) 786 WP_114625277.1 transcriptional repressor LexA Regulator
  OG627_RS07485 (OG627_07490) - 1826754..1828724 (-) 1971 WP_329062695.1 ATP-dependent DNA helicase -
  OG627_RS07490 (OG627_07495) - 1828763..1830544 (-) 1782 WP_329072461.1 IucA/IucC family siderophore biosynthesis protein -
  OG627_RS07495 (OG627_07500) - 1830734..1831486 (-) 753 WP_329072462.1 GNAT family N-acetyltransferase -

Sequence

Protein


Download         Length: 261 a.a.        Molecular weight: 28392.14 Da        Isoelectric Point: 7.4239

>NTDB_id=679457 OG627_RS07480 WP_114625277.1 1825872..1826657(+) (dinR/lexA) [Streptomyces sp. NBC_01429]
MTTTADSATITAQDRSQSRFEPVHAMNDAVMNPEGSKPTRSLPGRPPGIRADSSGLTDRQRRVIEVIRDSVQRRGYPPSM
REIGQAVGLSSTSSVAHQLMALERKGFLRRDPHRPRAYEVRGSDQPSTQQTDTTGKPAASYVPLVGRIAAGGPILAEESV
EDVFPLPRQLVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLDGEATVKRFRREEGHVWLLPHNAAY
QPIPGDDATILGKVVAVLRRV

Nucleotide


Download         Length: 786 bp        

>NTDB_id=679457 OG627_RS07480 WP_114625277.1 1825872..1826657(+) (dinR/lexA) [Streptomyces sp. NBC_01429]
GTGACCACCACCGCAGACAGTGCCACCATCACTGCCCAGGACCGCTCCCAGAGCCGATTCGAGCCGGTGCATGCCATGAA
TGACGCAGTCATGAACCCGGAGGGTTCCAAGCCCACCCGCTCACTGCCCGGCCGACCTCCAGGAATCAGGGCGGACAGCT
CCGGTCTCACCGACCGGCAGCGGAGGGTCATCGAAGTCATCCGTGACTCCGTGCAGAGGCGGGGCTACCCGCCCTCCATG
CGGGAGATCGGCCAGGCCGTGGGCCTCTCCAGCACCTCATCGGTGGCGCATCAGCTGATGGCCCTGGAGCGCAAGGGCTT
CCTGCGCCGCGATCCGCACCGGCCCAGGGCGTACGAAGTGCGCGGGTCGGACCAGCCGAGCACACAGCAGACGGACACGA
CCGGTAAGCCGGCCGCCTCGTACGTGCCGCTCGTCGGCCGGATCGCGGCCGGAGGGCCGATCCTCGCGGAGGAATCCGTC
GAGGATGTCTTCCCCCTCCCCCGCCAACTGGTGGGCGACGGAGAGCTGTTCGTACTGAAGGTCGTCGGCGACTCGATGAT
CGAAGCGGCGATCTGTGACGGCGACTGGGTGACGGTCCGCCGCCAGCCCGTCGCGGAGAACGGCGACATCGTCGCGGCCA
TGCTGGACGGCGAAGCCACCGTCAAGCGCTTCCGGCGCGAGGAGGGCCATGTCTGGCTGCTCCCGCACAACGCCGCCTAC
CAGCCGATTCCCGGTGACGACGCGACCATCCTCGGCAAGGTGGTGGCGGTCCTCCGGAGGGTGTGA

Domains

Predicted by InterProScan.

Peptidase S24-like (Peptidase_S24)

(143-255)

LexA DNA binding domain (LexA_DNA_bind)

(54-117)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A370B3D5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

45.755

81.226

0.372