Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilZ   Type   Machinery gene
Locus tag   MZN67_RS06645 Genome accession   NZ_CP096116
Coordinates   1472008..1472349 (+) Length   113 a.a.
NCBI ID   WP_025519545.1    Uniprot ID   A0A128V7G5
Organism   Legionella pneumophila subsp. pneumophila strain DFS-2111020037     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1467008..1477349
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MZN67_RS06620 (MZN67_06595) acpP 1467836..1468084 (+) 249 WP_003631752.1 acyl carrier protein -
  MZN67_RS06625 (MZN67_06600) fabF 1468104..1469342 (+) 1239 WP_027266549.1 beta-ketoacyl-ACP synthase II -
  MZN67_RS06630 (MZN67_06605) mltG 1469343..1470341 (+) 999 WP_038838265.1 endolytic transglycosylase MltG -
  MZN67_RS06635 (MZN67_06610) tmk 1470341..1470979 (+) 639 WP_011215415.1 dTMP kinase -
  MZN67_RS06640 (MZN67_06615) - 1470976..1471881 (+) 906 WP_038838267.1 DNA polymerase III subunit delta' C-terminal domain-containing protein -
  MZN67_RS06645 (MZN67_06620) pilZ 1472008..1472349 (+) 342 WP_025519545.1 PilZ domain-containing protein Machinery gene
  MZN67_RS06650 (MZN67_06625) - 1472405..1473193 (+) 789 WP_040148165.1 TatD family hydrolase -
  MZN67_RS06655 (MZN67_06630) - 1473305..1474405 (+) 1101 WP_027266544.1 anhydro-N-acetylmuramic acid kinase -
  MZN67_RS06660 (MZN67_06635) - 1474461..1475753 (+) 1293 WP_061692038.1 MFS transporter -
  MZN67_RS06665 (MZN67_06640) - 1475829..1477109 (-) 1281 WP_161516891.1 MFS transporter -

Sequence

Protein


Download         Length: 113 a.a.        Molecular weight: 12521.54 Da        Isoelectric Point: 8.2421

>NTDB_id=679455 MZN67_RS06645 WP_025519545.1 1472008..1472349(+) (pilZ) [Legionella pneumophila subsp. pneumophila strain DFS-2111020037]
MTEKPQLINCSFPNEASLYMAYMPFVKGGGLFIRTQHVYSLGQSLELSVKLLNENEPYLVTGKIVWITPKGAQGNKPPGV
GIQFTGENSRYLCNKIETYLAGMLKSCQVTDTI

Nucleotide


Download         Length: 342 bp        

>NTDB_id=679455 MZN67_RS06645 WP_025519545.1 1472008..1472349(+) (pilZ) [Legionella pneumophila subsp. pneumophila strain DFS-2111020037]
ATGACTGAAAAACCACAGCTTATAAACTGCTCATTTCCCAATGAAGCATCTTTGTATATGGCTTACATGCCTTTTGTGAA
AGGTGGCGGTCTTTTTATAAGAACTCAACACGTTTATTCTCTAGGGCAGTCGCTTGAATTATCTGTTAAATTGCTCAATG
AAAATGAACCATATTTGGTCACTGGTAAAATAGTCTGGATTACTCCTAAAGGTGCACAAGGTAATAAGCCGCCGGGAGTT
GGTATTCAATTTACCGGTGAAAACAGTCGTTATCTATGTAACAAGATAGAAACTTATTTGGCAGGAATGCTAAAATCATG
TCAGGTTACAGATACTATATAG

Domains

Predicted by InterproScan.

PilZ domain (PilZ)

(8-101)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A128V7G5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilZ Legionella pneumophila str. Paris

100

100

1
  pilZ Legionella pneumophila strain ERS1305867

100

100

1