Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG875_RS12760 Genome accession   NZ_CP109598
Coordinates   3025100..3026233 (+) Length   377 a.a.
NCBI ID   WP_330174334.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01498     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3020100..3031233
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG875_RS12745 (OG875_12740) - 3020395..3021279 (+) 885 WP_330174331.1 hypothetical protein -
  OG875_RS12750 (OG875_12745) - 3021601..3023472 (-) 1872 WP_330174332.1 hypothetical protein -
  OG875_RS12755 (OG875_12750) radA/sms 3023643..3025055 (+) 1413 WP_330174333.1 DNA repair protein RadA Machinery gene
  OG875_RS12760 (OG875_12755) disA 3025100..3026233 (+) 1134 WP_330174334.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG875_RS12765 (OG875_12760) - 3026469..3027341 (-) 873 WP_330174335.1 hypothetical protein -
  OG875_RS12770 - 3027522..3028523 (+) 1002 WP_330177727.1 phosphatase PAP2 family protein -
  OG875_RS12775 (OG875_12770) - 3028730..3029641 (+) 912 WP_330174336.1 A/G-specific adenine glycosylase -
  OG875_RS12780 (OG875_12775) - 3029918..3030478 (+) 561 WP_330174337.1 SigE family RNA polymerase sigma factor -

Sequence


Protein


Download         Length: 377 a.a.        Molecular weight: 40597.57 Da        Isoelectric Point: 5.0226

>NTDB_id=679424 OG875_RS12760 WP_330174334.1 3025100..3026233(+) (disA) [Streptomyces sp. NBC_01498]
MAANDRAAAPGKSGGGSGGSRTEALMRASLSAVAPGMALRDGLERILRGNTGGLIVLGMDKTVETMCTGGFVLDVEFTAT
RLRELCKLDGALILDKDITKILRAGVQLVPDASIPTEETGTRHRTADRVSKQCGFPVISVSQSMRLIALYVDGERRVLEE
SAAILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVSQRLEMVRRIATEIAEYVVELGTDGRLLALQLDE
LIAGVEPERELVVRDYVPEPTAKRSRTVAEAMTELDALSHTELLDLPVVARALGYSGSPETLDSAVSPRGYRLLAKVPRL
PGTIIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1134 bp        

>NTDB_id=679424 OG875_RS12760 WP_330174334.1 3025100..3026233(+) (disA) [Streptomyces sp. NBC_01498]
GTGGCAGCCAACGACCGGGCAGCAGCACCCGGAAAGTCCGGTGGTGGCTCCGGTGGATCCCGCACCGAAGCGCTGATGCG
GGCCTCGCTGAGCGCCGTGGCGCCCGGCATGGCGCTGCGCGACGGCCTGGAGCGGATCCTCCGGGGGAACACCGGCGGTC
TCATCGTCCTGGGCATGGACAAGACCGTCGAGACGATGTGCACGGGCGGCTTCGTGCTGGACGTGGAGTTCACCGCGACG
CGGCTGCGTGAGCTGTGCAAGCTCGACGGCGCGCTGATCCTCGACAAAGACATCACCAAGATTCTGCGGGCCGGGGTGCA
GCTCGTCCCGGACGCCTCCATCCCCACCGAGGAGACGGGCACCCGCCACCGCACGGCGGACCGGGTGTCCAAGCAGTGCG
GGTTCCCGGTGATCTCCGTGTCGCAGTCGATGCGGCTGATCGCGCTGTACGTGGACGGGGAGCGCCGGGTCCTGGAGGAG
TCGGCGGCCATCCTGTCGCGCGCCAACCAGGCCCTGGCGACGCTGGAGCGGTACAAGCTCCGGCTGGACGAGGTCGCGGG
CACGCTGTCCGCGCTGGAGATCGAGGACCTGGTCACGGTCCGGGACGTGTCGGCGGTCTCGCAGCGCCTGGAGATGGTGC
GCCGGATCGCCACGGAAATCGCCGAGTACGTCGTCGAGTTGGGCACCGACGGGCGGCTTCTCGCCCTCCAGCTGGACGAG
TTGATCGCGGGTGTCGAGCCCGAGCGGGAGCTGGTCGTCCGGGACTACGTACCGGAGCCGACCGCGAAGCGGTCCCGTAC
GGTCGCCGAGGCGATGACCGAACTGGACGCGCTCTCCCACACCGAGCTGCTGGATCTGCCGGTCGTGGCACGGGCGTTGG
GGTACAGCGGCTCGCCGGAGACGCTGGACTCGGCGGTCTCGCCGCGCGGTTACCGGCTGCTGGCCAAGGTGCCCCGGCTG
CCCGGCACCATCATCGAGCGGCTGGTCGAGCACTTCGGCGGGCTCCAGAAGCTGCTCGCCGCGAGTGTGGACGATCTCCA
GACGGTGGACGGGGTGGGCGAGGCGCGGGCGCGCAGCGTGCGCGAGGGCCTGTCGCGGCTGGCGGAGTCGTCCATCCTGG
AGCGGTACGTCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

46.218

94.695

0.438