Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   OG776_RS13615 Genome accession   NZ_CP109592
Coordinates   3244858..3245634 (+) Length   258 a.a.
NCBI ID   WP_054229877.1    Uniprot ID   A0A250VHF9
Organism   Streptomyces sp. NBC_01689     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 3239858..3250634
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG776_RS13600 (OG776_13590) - 3240010..3240543 (+) 534 WP_148010838.1 TerD family protein -
  OG776_RS13605 (OG776_13595) - 3240679..3243588 (-) 2910 WP_148010837.1 vitamin B12-dependent ribonucleotide reductase -
  OG776_RS13610 (OG776_13600) nrdR 3243738..3244316 (-) 579 WP_148010836.1 transcriptional regulator NrdR -
  OG776_RS13615 (OG776_13605) dinR/lexA 3244858..3245634 (+) 777 WP_054229877.1 transcriptional repressor LexA Regulator
  OG776_RS13620 (OG776_13610) - 3246214..3248226 (-) 2013 WP_148010835.1 ATP-dependent DNA helicase -
  OG776_RS13625 (OG776_13615) - 3248339..3250336 (-) 1998 WP_329320853.1 IucA/IucC family siderophore biosynthesis protein -

Sequence

Protein


Download         Length: 258 a.a.        Molecular weight: 27935.63 Da        Isoelectric Point: 7.4755

>NTDB_id=679329 OG776_RS13615 WP_054229877.1 3244858..3245634(+) (dinR/lexA) [Streptomyces sp. NBC_01689]
MTTTADSATITAQDRSQGRLEPVHAMNEATNHEGPKRSLPGRPPGIRADSSGLTDRQRRVIEVIRDSVQRRGYPPSMREI
GQAVGLSSTSSVAHQLMALERKGFLRRDPHRPRAYEVRGSDQSSAQPTDTAGKPAASYVPLVGRIAAGGPILAEESVEDV
FPLPRQLVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLDGEATVKRFKREDGHVWLLPHNAAYQPI
PGDEATILGKVVAVLRRV

Nucleotide


Download         Length: 777 bp        

>NTDB_id=679329 OG776_RS13615 WP_054229877.1 3244858..3245634(+) (dinR/lexA) [Streptomyces sp. NBC_01689]
GTGACCACCACCGCAGACAGCGCCACCATCACTGCCCAGGACCGCTCCCAGGGCCGACTCGAGCCGGTGCATGCGATGAA
CGAAGCCACGAACCATGAGGGGCCCAAGCGCTCCCTGCCGGGCCGACCTCCAGGCATCCGCGCGGACAGCTCGGGACTCA
CCGACAGGCAACGCCGGGTGATCGAGGTCATCAGGGACTCCGTGCAACGGCGCGGCTACCCGCCGTCGATGCGGGAGATC
GGACAGGCGGTAGGCCTCTCCAGCACCTCGTCGGTCGCCCACCAGCTGATGGCACTGGAGCGCAAGGGCTTCCTGCGCCG
CGACCCGCACCGCCCGCGCGCGTACGAGGTCAGGGGCTCCGACCAGTCCTCGGCCCAGCCCACGGACACGGCGGGCAAGC
CGGCCGCGTCGTACGTGCCGCTCGTCGGCCGCATCGCCGCCGGTGGCCCGATCCTCGCCGAGGAGTCCGTGGAGGACGTC
TTCCCGCTCCCCCGGCAGCTGGTGGGTGACGGTGAGCTGTTCGTCCTCAAGGTCGTCGGTGACTCGATGATCGAGGCCGC
CATCTGTGACGGGGACTGGGTGACGGTCCGCCGCCAGCCCGTCGCGGAGAACGGCGACATCGTCGCCGCGATGCTGGACG
GCGAGGCGACCGTGAAGCGGTTCAAGCGCGAGGACGGCCATGTCTGGCTGCTCCCGCACAACGCGGCCTACCAGCCGATC
CCCGGTGACGAGGCGACCATCCTGGGCAAGGTGGTGGCCGTACTGCGGCGCGTGTGA

Domains

Predicted by InterProScan.

Peptidase S24-like (Peptidase_S24)

(140-252)

LexA DNA binding domain (LexA_DNA_bind)

(51-114)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A250VHF9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

45.714

81.395

0.372