Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   OG467_RS14990 Genome accession   NZ_CP109589
Coordinates   3347079..3347864 (+) Length   261 a.a.
NCBI ID   WP_100591111.1    Uniprot ID   A0ABV4SX88
Organism   Streptomyces sp. NBC_01361     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 3342079..3352864
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG467_RS14975 (OG467_15015) - 3342369..3342896 (+) 528 WP_326773779.1 TerD family protein -
  OG467_RS14980 (OG467_15020) - 3342974..3345880 (-) 2907 WP_329569608.1 vitamin B12-dependent ribonucleotide reductase -
  OG467_RS14985 (OG467_15025) nrdR 3346017..3346562 (-) 546 WP_326773781.1 transcriptional regulator NrdR -
  OG467_RS14990 (OG467_15030) dinR/lexA 3347079..3347864 (+) 786 WP_100591111.1 transcriptional repressor LexA Regulator
  OG467_RS14995 (OG467_15035) - 3348046..3350028 (-) 1983 WP_329569610.1 ATP-dependent DNA helicase -
  OG467_RS15000 (OG467_15040) - 3350069..3352009 (-) 1941 WP_329581514.1 IucA/IucC family siderophore biosynthesis protein -

Sequence

Protein


Download         Length: 261 a.a.        Molecular weight: 28153.94 Da        Isoelectric Point: 7.4237

>NTDB_id=679236 OG467_RS14990 WP_100591111.1 3347079..3347864(+) (dinR/lexA) [Streptomyces sp. NBC_01361]
MTTTADSATITAQDRSQGRLEPVHAMNDASMSAEGPKPARSLPGRPPGIRADSSGLTDRQRRVIEVIRDSVQRRGYPPSM
REIGQAVGLSSTSSVAHQLMALERKGFLRRDPHRPRAYEVRGSDQPSAQPTDTAGKPAASYVPLVGRIAAGGPILAEESV
EDVFPLPRQLVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLEGEATVKRFKREDGHVWLLPHNSAY
QPIPGDEATILGKVVAVLRRV

Nucleotide


Download         Length: 786 bp        

>NTDB_id=679236 OG467_RS14990 WP_100591111.1 3347079..3347864(+) (dinR/lexA) [Streptomyces sp. NBC_01361]
GTGACCACCACCGCAGACAGCGCCACCATCACTGCCCAGGACCGTTCCCAGGGCCGACTCGAGCCGGTGCATGCCATGAA
TGACGCATCCATGAGCGCGGAGGGGCCAAAGCCCGCGCGCTCCTTGCCGGGCCGACCTCCCGGAATCCGCGCGGACAGCT
CGGGGCTCACGGACAGGCAGCGCCGCGTCATCGAGGTGATCAGGGACTCCGTGCAGCGGCGTGGTTACCCGCCGTCGATG
CGGGAGATCGGCCAGGCGGTGGGCCTGTCGAGCACGTCGTCGGTCGCGCACCAGCTGATGGCCCTCGAGCGCAAGGGCTT
CCTGCGCCGGGACCCGCACCGCCCCCGCGCCTACGAGGTCCGCGGGTCCGACCAGCCGAGCGCACAGCCCACGGACACCG
CGGGCAAGCCGGCCGCGTCGTATGTCCCGCTCGTCGGCCGCATCGCCGCCGGTGGCCCGATCCTCGCCGAAGAGTCCGTC
GAGGACGTGTTCCCCCTCCCCCGGCAGCTGGTCGGAGACGGTGAGCTGTTCGTCCTGAAGGTCGTCGGCGACTCGATGAT
CGAGGCGGCGATCTGCGACGGCGACTGGGTCACGGTCCGCCGCCAGCCGGTCGCGGAGAACGGCGACATCGTCGCCGCGA
TGCTCGAGGGAGAGGCCACCGTCAAGCGCTTCAAGCGCGAGGACGGCCATGTGTGGCTGCTGCCGCACAACTCCGCGTAC
CAGCCGATCCCCGGTGACGAGGCGACCATTCTCGGCAAGGTGGTGGCCGTTCTGCGGCGGGTGTGA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(54-117)

Peptidase S24-like (Peptidase_S24)

(143-255)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

46.226

81.226

0.375