Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG465_RS26975 Genome accession   NZ_CP109580
Coordinates   5671431..5672555 (-) Length   374 a.a.
NCBI ID   WP_266603467.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01367     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 5666431..5677555
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG465_RS26945 (OG465_26885) cseB 5666547..5667260 (-) 714 WP_328789351.1 two-component system response regulator CseB -
  OG465_RS26950 (OG465_26890) - 5667290..5667922 (-) 633 WP_327383946.1 hypothetical protein -
  OG465_RS26955 (OG465_26895) - 5667958..5668518 (-) 561 WP_327383944.1 SigE family RNA polymerase sigma factor -
  OG465_RS26960 (OG465_26900) - 5668703..5669668 (-) 966 WP_405788270.1 A/G-specific adenine glycosylase -
  OG465_RS26965 (OG465_26905) - 5669692..5670318 (-) 627 WP_405788272.1 phosphatase PAP2 family protein -
  OG465_RS26970 (OG465_26910) - 5670542..5671297 (+) 756 WP_384838635.1 hypothetical protein -
  OG465_RS26975 (OG465_26915) disA 5671431..5672555 (-) 1125 WP_266603467.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG465_RS26980 (OG465_26920) radA/sms 5672819..5674231 (-) 1413 WP_405788274.1 DNA repair protein RadA Machinery gene
  OG465_RS26985 (OG465_26925) - 5674733..5676502 (+) 1770 WP_405788276.1 BACON domain-containing protein -
  OG465_RS26990 (OG465_26930) - 5676607..5677359 (-) 753 WP_384838672.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40406.37 Da        Isoelectric Point: 4.9472

>NTDB_id=679103 OG465_RS26975 WP_266603467.1 5671431..5672555(-) (disA) [Streptomyces sp. NBC_01367]
MAAKDGAAASGKSGASSKQEAMMRASLSAVAPGQPLRDGLERIVRGNTGGLIVLGMDKSVEAMCTGGFVLDVEFTATRLR
ELCKLDGALILDKDITKILRAGVQLVPDASIPTEETGTRHRTADRVSKQCGFPVVSVSQSMRLIALYVDGERRVLEESGA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELTV
GIEQERELVIRDYVPEPTAKRSRTVDEALAELDALTHPELLELPIVARALGYTGSPETLDSAVSPRGYRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=679103 OG465_RS26975 WP_266603467.1 5671431..5672555(-) (disA) [Streptomyces sp. NBC_01367]
GTGGCAGCCAAGGACGGGGCAGCAGCATCCGGAAAGTCGGGTGCGAGCTCCAAGCAGGAGGCCATGATGCGCGCCTCGCT
GAGCGCGGTCGCACCTGGTCAGCCGCTGCGTGACGGCTTGGAGCGGATCGTCCGCGGCAACACCGGCGGGCTCATCGTCC
TCGGTATGGACAAGAGCGTCGAGGCGATGTGCACCGGCGGCTTCGTCCTGGACGTGGAGTTCACCGCGACCAGGCTGCGC
GAGCTGTGCAAGCTCGACGGCGCGCTCATCCTCGACAAGGACATCACCAAGATCCTGCGGGCCGGTGTGCAGCTGGTGCC
GGACGCGTCGATCCCGACGGAGGAGACGGGCACGCGCCACCGTACGGCCGACCGCGTCTCCAAGCAGTGCGGCTTCCCGG
TGGTGTCGGTGTCGCAGTCGATGCGGCTGATCGCGCTGTACGTGGACGGGGAGCGGCGGGTCCTGGAGGAGTCCGGGGCG
ATCCTGTCGCGGGCGAACCAGGCGCTGGCCACGCTGGAGCGGTACAAGCTGCGCCTCGACGAGGTCGCGGGCACGCTGTC
GGCGCTGGAGATCGAGGACCTGGTCACGGTGCGCGACGTGACGGCGGTCGCGCAGCGGCTGGAAATGGTCCGCCGGATCG
CGACCGAGATCGCCGAGTACGTGGTCGAACTGGGCACGGACGGGCGACTGCTGTCGCTGCAACTGGACGAGCTGACGGTC
GGGATCGAGCAGGAGCGGGAGCTGGTCATCCGGGACTACGTGCCGGAACCGACGGCGAAGCGTTCCCGCACGGTGGACGA
GGCGCTGGCGGAGCTGGACGCGCTGACGCATCCGGAGCTGCTGGAGCTGCCGATCGTGGCGCGGGCCCTGGGGTACACGG
GCTCGCCGGAGACGCTGGACTCTGCGGTGTCGCCGCGCGGGTACCGACTGCTGGCGAAGGTGCCGCGGCTGCCGGGCGCG
ATCATCGAGCGGCTCGTGGAGCACTTCGGCGGGCTGCAGAAGCTGCTCGCCGCGAGCGTCGACGACCTGCAGACGGTGGA
CGGGGTGGGCGAGGCCCGTGCGCGGAGCGTCCGCGAGGGCCTGTCCCGGCTGGCGGAGTCGTCCATCCTGGAGCGGTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.983

96.524

0.444