Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   MU858_RS20945 Genome accession   NZ_CP095874
Coordinates   4048462..4049256 (-) Length   264 a.a.
NCBI ID   WP_033686380.1    Uniprot ID   A0A4Y6EYG5
Organism   Bacillus sp. PGP15     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 4043462..4054256
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MU858_RS20925 (MU858_20925) - 4045250..4045483 (+) 234 WP_001190188.1 DUF2627 domain-containing protein -
  MU858_RS20930 (MU858_20930) - 4045535..4046263 (-) 729 WP_048531043.1 glycerophosphodiester phosphodiesterase -
  MU858_RS20935 (MU858_20935) - 4046314..4046460 (+) 147 WP_001247671.1 YycC family protein -
  MU858_RS20940 (MU858_20940) - 4046649..4048175 (-) 1527 WP_048531045.1 glycosyltransferase family 39 protein -
  MU858_RS20945 (MU858_20945) spo0A 4048462..4049256 (-) 795 WP_033686380.1 sporulation transcription factor Spo0A Regulator
  MU858_RS20950 (MU858_20950) spoIVB 4049544..4050842 (-) 1299 WP_048531049.1 SpoIVB peptidase -
  MU858_RS20955 (MU858_20955) recN 4050961..4052700 (-) 1740 WP_166688062.1 DNA repair protein RecN Machinery gene
  MU858_RS20960 (MU858_20960) argR 4052968..4053417 (-) 450 WP_001032581.1 arginine repressor ArgR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29454.20 Da        Isoelectric Point: 7.4718

>NTDB_id=679011 MU858_RS20945 WP_033686380.1 4048462..4049256(-) (spo0A) [Bacillus sp. PGP15]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGTAYNGQECLNLLKDKQPDVLVLDIIMPHLDGLAVLEKMRHIERLRQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKANATIKRPLPSFRSATTIDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=679011 MU858_RS20945 WP_033686380.1 4048462..4049256(-) (spo0A) [Bacillus sp. PGP15]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAATTAGTATCAATGCTAGAGAGTTATGTTGCTGCTCAAGA
TGATATGGAAGTAATCGGTACTGCTTATAATGGTCAAGAGTGTTTAAATTTATTAAAAGACAAGCAGCCGGATGTACTTG
TTTTAGACATTATTATGCCACATTTAGATGGATTAGCTGTATTAGAGAAAATGCGACATATTGAAAGGCTAAGACAGCCT
AGCGTAATTATGTTGACAGCATTTGGACAAGAAGATGTGACGAAAAAAGCAGTTGACTTAGGTGCTTCATATTTCATATT
AAAACCATTTGATATGGAGAATTTAACGAGTCATATTCGTCAAGTAAGCGGTAAAGCGAACGCTACTATTAAACGTCCAC
TTCCATCTTTCCGTTCAGCAACGACAATAGATGGAAAGCCGAAAAACTTAGATGCAAGCATTACGAGTATCATTCATGAA
ATTGGTGTGCCTGCTCATATTAAAGGGTATATGTACTTAAGGGAAGCGATCTCTATGGTGTACAACGATATCGAATTACT
TGGATCTATTACGAAAGTATTGTATCCAGATATTGCAAAGAAATATAATACAACAGCAAGCCGTGTTGAGCGAGCAATCC
GTCATGCGATTGAAGTAGCATGGAGTCGTGGGAATATTGATTCTATTTCGTCTTTATTCGGTTATACAGTATCTATGTCA
AAAGCAAAACCTACGAACTCCGAGTTCATTGCAATGGTTGCGGATAAGTTGAGACTTGAACATAAGGCTAGTTGA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4Y6EYG5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

80.899

100

0.818