Detailed information NTG0678971

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: MXF72_RS03865
• Genome accession: NZ_CP095873
• Coordinates: 882469..883494 (+)
• Length: 341 a.a.
• NCBI ID: WP_348773217.1
• Uniprot ID: -
• Organism: Alcaligenes faecalis strain D334
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 877469..888494

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MXF72_RS03845 (MXF72_03845)	-	879993..880385 (+)	393	WP_115634358.1	MOSC N-terminal beta barrel domain-containing protein	-
MXF72_RS03850 (MXF72_03850)	-	880449..880706 (-)	258	WP_009454772.1	YfhL family 4Fe-4S dicluster ferredoxin	-
MXF72_RS03855 (MXF72_03855)	coaD	880792..881298 (-)	507	WP_009454773.1	pantetheine-phosphate adenylyltransferase	-
MXF72_RS03860 (MXF72_03860)	rsmD	881319..881948 (-)	630	WP_009454775.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
MXF72_RS03865 (MXF72_03865)	pilA	882469..883494 (+)	1026	WP_348773217.1	signal recognition particle-docking protein FtsY	Machinery gene
MXF72_RS03870 (MXF72_03870)	-	883636..885165 (-)	1530	WP_022983223.1	CYTH and CHAD domain-containing protein	-
MXF72_RS03875 (MXF72_03875)	-	885285..886112 (-)	828	WP_022983222.1	IclR family transcriptional regulator	-
MXF72_RS03880 (MXF72_03880)	ribBA	886228..887394 (+)	1167	WP_009454780.1	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	-
MXF72_RS03885 (MXF72_03885)	ribH	887409..887927 (+)	519	WP_009454781.1	6,7-dimethyl-8-ribityllumazine synthase	-
MXF72_RS03890 (MXF72_03890)	nusB	887881..888396 (+)	516	WP_042488795.1	transcription antitermination factor NusB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 35878.37 Da
• Isoelectric Point: 5.7385

>NTDB_id=678971 MXF72_RS03865 WP_348773217.1 882469..883494(+) (pilA) [Alcaligenes faecalis strain D334]
MQPTPEPEPEIVPVPAPQPDPAPAPRPEPEAAAPVVKTSWMARLKQGLSRTGQSLSSLFVGAKVDETLFEELEDALLMAD
AGVEATEKLITALRARVRKEKISDAAQVKQALCDILTDHLKPLEKSFPLESSKPLVVMIAGVNGAGKTTSIGKLAHTFQE
QGAKVLLAAGDTFRAAAREQLIEWGTRNNVSVIAQDGGDPAAVAFDAVHAGRARDMGVVMVDTAGRLPTQLHLMEELKKI
KRVIGKADGQAPHEILLVVDGNTGQNAISQIRAFDAALGLTGLVVTKLDGTAKGGTLAAVAACAQGVRPIPVYWIGVGEG
MQDLQAFVAREFASALLGMTA

Nucleotide

• Length: 1026 bp

>NTDB_id=678971 MXF72_RS03865 WP_348773217.1 882469..883494(+) (pilA) [Alcaligenes faecalis strain D334]
ATACAGCCGACTCCTGAACCGGAGCCAGAGATTGTTCCAGTTCCTGCGCCACAGCCTGACCCAGCACCTGCCCCGAGGCC
AGAGCCAGAAGCCGCCGCACCTGTGGTGAAAACTTCCTGGATGGCACGCTTGAAACAGGGCTTGTCGCGTACCGGTCAGA
GCTTGAGCAGCCTGTTCGTCGGTGCCAAGGTTGATGAAACGCTGTTCGAGGAACTGGAAGACGCCTTGCTGATGGCAGAC
GCGGGTGTTGAGGCTACCGAGAAACTGATTACCGCTTTGCGTGCTCGTGTTCGTAAGGAAAAAATCAGTGATGCAGCCCA
AGTCAAACAAGCCCTGTGCGACATCCTGACCGATCATTTGAAGCCCCTGGAGAAATCCTTTCCTCTGGAATCGAGCAAAC
CACTGGTAGTCATGATTGCCGGGGTGAATGGGGCAGGTAAAACCACGTCTATCGGTAAGTTGGCCCACACCTTCCAGGAG
CAGGGCGCAAAAGTCTTGTTGGCCGCCGGTGATACCTTCCGTGCTGCCGCTCGTGAACAGCTGATTGAGTGGGGCACCCG
CAATAACGTCAGTGTTATTGCTCAGGACGGTGGTGACCCCGCCGCGGTGGCGTTTGATGCTGTGCATGCAGGGCGTGCCC
GCGATATGGGCGTGGTCATGGTGGATACCGCCGGCCGCTTGCCAACCCAGCTTCACCTGATGGAAGAGCTCAAGAAGATC
AAGCGCGTCATCGGCAAGGCCGATGGTCAGGCTCCTCATGAAATTCTCTTGGTTGTGGACGGCAATACCGGCCAGAACGC
CATTTCGCAGATCCGTGCCTTTGATGCAGCCTTGGGTCTGACTGGCCTGGTGGTTACCAAGCTGGACGGCACGGCCAAAG
GCGGTACGCTGGCTGCCGTTGCTGCCTGTGCGCAAGGCGTACGTCCTATTCCGGTTTACTGGATTGGCGTGGGCGAGGGC
ATGCAGGATCTGCAGGCCTTTGTGGCCCGTGAGTTTGCGTCGGCCTTGTTGGGCATGACCGCTTAA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (135-338)

• SRP54-type protein, helical bundle domain (SRP54_N) (52-116)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	59.477	89.736	0.534