Detailed information NTG0678916

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG512_RS18790
• Genome accession: NZ_CP109565
• Coordinates: 3929902..3931188 (-)
• Length: 428 a.a.
• NCBI ID: WP_266564255.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01378
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 3924902..3936188

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG512_RS18775 (OG512_18680)	-	3925402..3928032 (-)	2631	WP_355691322.1	valine--tRNA ligase	-
OG512_RS18780 (OG512_18685)	-	3928218..3929186 (+)	969	WP_355691320.1	hypothetical protein	-
OG512_RS18785 (OG512_18690)	-	3929365..3929817 (+)	453	WP_355691318.1	hypothetical protein	-
OG512_RS18790 (OG512_18695)	clpX	3929902..3931188 (-)	1287	WP_266564255.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG512_RS18795 (OG512_18700)	clpP	3931344..3932003 (-)	660	WP_227294656.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG512_RS18800 (OG512_18705)	clpP	3932057..3932665 (-)	609	WP_266569404.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG512_RS18805 (OG512_18710)	tig	3932950..3934338 (-)	1389	WP_266564251.1	trigger factor	-
OG512_RS18820 (OG512_18725)	-	3934856..3935050 (-)	195	WP_100594330.1	hypothetical protein	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46822.50 Da
• Isoelectric Point: 4.7856

>NTDB_id=678916 OG512_RS18790 WP_266564255.1 3929902..3931188(-) (clpX) [Streptomyces sp. NBC_01378]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEA
AKKALSVAVYNHYKRVQAGENGGAQGRDDAIELSKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIESRAGAKGIGFGATIHSKRELEEKDQFQEVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILLEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRRTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
AEAVHSNVNPTLIPRDARGSGSGEQKSA

Nucleotide

• Length: 1287 bp

>NTDB_id=678916 OG512_RS18790 WP_266564255.1 3929902..3931188(-) (clpX) [Streptomyces sp. NBC_01378]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGCCCCGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAAGAGCTCGCGGAGACGA
GCGAGGTCCGCTGGGAAGAACTTCCCAAGCCTCGCGAGATCTACGAGTTCCTCGAAGGCTATGTCGTCGGCCAGGAGGCC
GCGAAGAAAGCCCTCTCGGTCGCTGTGTACAACCATTACAAGCGGGTTCAGGCCGGTGAGAACGGCGGAGCCCAGGGACG
CGACGACGCGATCGAGCTGTCGAAGTCCAACATCCTGCTCCTGGGCCCCACGGGCTCGGGCAAGACGCTCCTGGCCCAGA
CTCTGGCCCGCATGCTGAACGTTCCGTTCGCCATCGCCGACGCGACGGCGCTCACGGAGGCCGGCTATGTGGGCGAGGAC
GTCGAGAACATCCTCCTGAAGCTGATCCAGGCGGCTGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACGCGCGATGTGTCCGGTGAGGGCGTCCAGCAGGCCC
TGCTCAAGATCCTCGAGGGGACCACGGCTTCCGTCCCGCCCCAGGGCGGCCGCAAGCACCCCCATCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGCGCGTTCGCCGGCCTGGAGAAGATCATCGAGTCGCGGGCGGGTGC
CAAGGGCATCGGCTTCGGCGCGACGATCCACTCCAAGCGCGAGCTGGAGGAGAAGGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGTCTCCCCGTCATCACCTCGGTCCACAACCTGGACCGC
GAGGCGCTCCTCCAGATCCTCCTGGAGCCGCGCAACGCCCTGGTGAAGCAGTACCAGCGCCTCTTCGAACTCGACGGCGT
GGAGCTGGACTTCGAGCGCGAGGCCCTGGAGGCCATCGCCGACCAGGCCATCCTGCGCCGCACCGGCGCGCGCGGCCTGC
GCGCGATCATGGAGGAAGTCCTCCAGTCCGTGATGTACGAGGTCCCCTCCCGCAAGGACGTGGCCCGCGTCGTCATCACG
GCAGAGGCCGTCCACTCGAACGTGAACCCGACGCTGATCCCCCGCGACGCCCGCGGCTCGGGCAGCGGCGAACAGAAGTC
GGCCTAG

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.433	93.925	0.596
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.745	96.028	0.526