Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | MW889_RS06300 | Genome accession | NZ_CP095867 |
| Coordinates | 1327789..1328169 (+) | Length | 126 a.a. |
| NCBI ID | WP_004887479.1 | Uniprot ID | - |
| Organism | Acinetobacter nosocomialis strain 11J360 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1322789..1333169
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MW889_RS06270 (MW889_06290) | kdsB | 1323694..1324455 (+) | 762 | WP_004887485.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| MW889_RS06275 (MW889_06295) | - | 1324467..1325447 (+) | 981 | WP_004887483.1 | DNA polymerase III subunit delta' | - |
| MW889_RS06280 (MW889_06300) | - | 1325460..1325801 (+) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| MW889_RS06285 (MW889_06305) | - | 1325819..1326592 (+) | 774 | WP_004887481.1 | TatD family hydrolase | - |
| MW889_RS06290 (MW889_06310) | - | 1326630..1327238 (+) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| MW889_RS06295 (MW889_06315) | - | 1327248..1327799 (+) | 552 | WP_002049902.1 | type II secretion system protein | - |
| MW889_RS06300 (MW889_06320) | xcpV | 1327789..1328169 (+) | 381 | WP_004887479.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| MW889_RS06305 (MW889_06325) | xcpW | 1328169..1328984 (+) | 816 | WP_033846335.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| MW889_RS06310 (MW889_06330) | gspK | 1328984..1329943 (+) | 960 | WP_004887476.1 | type II secretion system minor pseudopilin GspK | - |
| MW889_RS06315 (MW889_06335) | - | 1330173..1330769 (+) | 597 | WP_004887474.1 | 6-carboxytetrahydropterin synthase | - |
| MW889_RS06320 (MW889_06340) | ung | 1330820..1331533 (+) | 714 | WP_002049829.1 | uracil-DNA glycosylase | - |
| MW889_RS06325 (MW889_06345) | - | 1331530..1332654 (+) | 1125 | WP_006580787.1 | enoyl-CoA hydratase/isomerase family protein | - |
| MW889_RS06330 (MW889_06350) | tadA | 1332661..1333164 (+) | 504 | WP_006580788.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 14024.27 Da Isoelectric Point: 9.7155
>NTDB_id=678873 MW889_RS06300 WP_004887479.1 1327789..1328169(+) (xcpV) [Acinetobacter nosocomialis strain 11J360]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEIAMMEINQEWLQGTQTKQVTSQGETWQI
YKSAESTVSPNVQKIDVQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEIAMMEINQEWLQGTQTKQVTSQGETWQI
YKSAESTVSPNVQKIDVQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=678873 MW889_RS06300 WP_004887479.1 1327789..1328169(+) (xcpV) [Acinetobacter nosocomialis strain 11J360]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTAGCAGCTGTTGCTTTAACTAA
AGTGGCAATGCAGTACACTCAGTCTACTTCTAATGCCATTTTAAGAACTAAAGCTCAATTTGTAGCTATGAATGAAATTG
CTATGATGGAGATTAATCAAGAGTGGCTGCAGGGCACTCAAACTAAGCAAGTAACTTCTCAAGGAGAGACTTGGCAGATT
TATAAATCAGCTGAATCAACTGTTAGCCCTAATGTTCAAAAAATTGATGTACAAGTTAGCTTATATGATCCGGATAAGGG
AAAAGTACAAAACGGTATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTAGCAGCTGTTGCTTTAACTAA
AGTGGCAATGCAGTACACTCAGTCTACTTCTAATGCCATTTTAAGAACTAAAGCTCAATTTGTAGCTATGAATGAAATTG
CTATGATGGAGATTAATCAAGAGTGGCTGCAGGGCACTCAAACTAAGCAAGTAACTTCTCAAGGAGAGACTTGGCAGATT
TATAAATCAGCTGAATCAACTGTTAGCCCTAATGTTCAAAAAATTGATGTACAAGTTAGCTTATATGATCCGGATAAGGG
AAAAGTACAAAACGGTATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
95.238 |
100 |
0.952 |