Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   MW889_RS01050 Genome accession   NZ_CP095867
Coordinates   227121..227531 (+) Length   136 a.a.
NCBI ID   WP_033846489.1    Uniprot ID   -
Organism   Acinetobacter nosocomialis strain 11J360     
Function   dsDNA binding (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 222121..232531
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MW889_RS01035 (MW889_01045) - 223112..225418 (+) 2307 WP_002054537.1 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase -
  MW889_RS01040 (MW889_01050) - 225461..226234 (-) 774 WP_033846487.1 SDR family oxidoreductase -
  MW889_RS01045 (MW889_01055) mazG 226346..227152 (+) 807 WP_033846488.1 nucleoside triphosphate pyrophosphohydrolase -
  MW889_RS01050 (MW889_01060) comEA 227121..227531 (+) 411 WP_033846489.1 ComEA family DNA-binding protein Machinery gene
  MW889_RS01055 (MW889_01065) pcnB 227657..229120 (+) 1464 WP_004710567.1 polynucleotide adenylyltransferase PcnB -
  MW889_RS01060 (MW889_01070) folK 229117..229599 (+) 483 WP_006581366.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  MW889_RS01065 (MW889_01075) panB 229645..230454 (+) 810 WP_000624763.1 3-methyl-2-oxobutanoate hydroxymethyltransferase -
  MW889_RS01070 (MW889_01080) panC 230458..231306 (+) 849 WP_002054580.1 pantoate--beta-alanine ligase -
  MW889_RS01075 (MW889_01085) rapZ 231329..232180 (+) 852 WP_002054547.1 RNase adapter RapZ -
  MW889_RS01080 (MW889_01090) - 232177..232446 (+) 270 WP_000567533.1 HPr family phosphocarrier protein -

Sequence

Protein


Download         Length: 136 a.a.        Molecular weight: 15656.11 Da        Isoelectric Point: 10.4097

>NTDB_id=678867 MW889_RS01050 WP_033846489.1 227121..227531(+) (comEA) [Acinetobacter nosocomialis strain 11J360]
MRYSMRLWKNNCFILMMLCLGVISPSVFAQSFDQNFQEWKAKQQMYDQKLNVSKSSHSYGSKIYQTKSLNDSIGQIHLNQ
ATVNEFRQLKGIGEKKAQAIVEYRQKNGGFKNIDEIKNVKGIGPAIFEKNKSRLAL

Nucleotide


Download         Length: 411 bp        

>NTDB_id=678867 MW889_RS01050 WP_033846489.1 227121..227531(+) (comEA) [Acinetobacter nosocomialis strain 11J360]
ATGCGATACAGCATGAGACTTTGGAAAAATAATTGTTTTATTTTAATGATGTTGTGCTTAGGTGTGATTTCACCTTCGGT
TTTTGCTCAATCGTTTGATCAGAATTTTCAGGAATGGAAGGCTAAACAGCAGATGTACGACCAAAAGTTAAACGTCTCTA
AATCTTCTCATTCTTATGGTTCTAAAATTTATCAAACGAAGAGTTTAAATGATTCTATTGGGCAGATTCATTTAAATCAG
GCTACTGTAAATGAGTTTCGGCAGTTAAAAGGTATAGGTGAGAAAAAGGCTCAAGCGATTGTGGAATACAGGCAAAAGAA
TGGTGGTTTTAAAAATATTGATGAAATTAAAAACGTCAAAGGAATCGGCCCCGCTATTTTTGAAAAAAATAAATCACGTT
TAGCCTTATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(74-134)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Acinetobacter baumannii strain A118

86.765

100

0.868
  comEA Acinetobacter baumannii D1279779

86.765

100

0.868
  comEA Acinetobacter baylyi ADP1

47.273

80.882

0.382