Detailed information NTG0678776

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: MYE78_RS16765
• Genome accession: NZ_CP095842
• Coordinates: 3395174..3396337 (-)
• Length: 387 a.a.
• NCBI ID: WP_007407484.1
• Uniprot ID: A3KLC1
• Organism: Bacillus velezensis strain EM-1
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3390174..3401337

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MYE78_RS16735	-	3390438..3390857 (-)	420	WP_012118571.1	TIGR03826 family flagellar region protein	-
MYE78_RS16740	comFC	3390931..3391620 (-)	690	WP_196770545.1	phosphoribosyltransferase family protein	Machinery gene
MYE78_RS16745	-	3391626..3391910 (-)	285	WP_003151389.1	late competence development ComFB family protein	-
MYE78_RS16750	comFA	3391968..3393353 (-)	1386	WP_032876163.1	DEAD/DEAH box helicase	Machinery gene
MYE78_RS16755	-	3393462..3394310 (-)	849	WP_032876160.1	DegV family protein	-
MYE78_RS16760	degU	3394408..3395097 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
MYE78_RS16765	degS	3395174..3396337 (-)	1164	WP_007407484.1	two-component sensor histidine kinase DegS	Regulator
MYE78_RS16770	-	3396560..3397207 (+)	648	WP_007614107.1	YigZ family protein	-
MYE78_RS16775	-	3397212..3398393 (+)	1182	WP_032876157.1	LCP family protein	-
MYE78_RS16780	-	3398492..3399568 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
MYE78_RS16785	-	3399701..3400897 (-)	1197	WP_032876154.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.78 Da
• Isoelectric Point: 6.8616

>NTDB_id=678776 MYE78_RS16765 WP_007407484.1 3395174..3396337(-) (degS) [Bacillus velezensis strain EM-1]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=678776 MYE78_RS16765 WP_007407484.1 3395174..3396337(-) (degS) [Bacillus velezensis strain EM-1]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATTATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTACGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGCATCGGAGACACAGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTCATCATTAAGGACAATGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A3KLC1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.584	99.483	0.951