Detailed information    

insolico Bioinformatically predicted

Overview


Name   rcrP   Type   Regulator
Locus tag   OG204_RS10720 Genome accession   NZ_CP109556
Coordinates   2345477..2347210 (+) Length   577 a.a.
NCBI ID   WP_250298194.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01387     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context


Location: 2340477..2352210
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG204_RS10710 (OG204_10725) - 2343593..2343892 (+) 300 WP_250298192.1 YtxH domain-containing protein -
  OG204_RS10715 (OG204_10730) - 2343923..2345368 (+) 1446 WP_329165730.1 FGGY family carbohydrate kinase -
  OG204_RS10720 (OG204_10735) rcrP 2345477..2347210 (+) 1734 WP_250298194.1 ABC transporter ATP-binding protein Regulator
  OG204_RS10725 (OG204_10740) rcrQ 2347210..2349132 (+) 1923 WP_250298195.1 ABC transporter ATP-binding protein Regulator
  OG204_RS10730 (OG204_10745) - 2349307..2350530 (-) 1224 WP_405684952.1 sigma-70 family RNA polymerase sigma factor -

Sequence


Protein


Download         Length: 577 a.a.        Molecular weight: 62773.16 Da        Isoelectric Point: 5.9737

>NTDB_id=678573 OG204_RS10720 WP_250298194.1 2345477..2347210(+) (rcrP) [Streptomyces sp. NBC_01387]
MLIQLLRTYLRPYKKPMALLALLQLFQTCATLYLPTLNADIIDNGVVKGDSGYILTFGGVMIAISVVQVICNIGAVYFGA
RTASALGRDIRAGVFDRVQSFSAREVGHFGAPSLITRTTNDVQQIQMLVLMSFTLMASAPIMCVGAIVLALGQDVPLSLV
LVAVLPVMLVLVSLIVRRMRPLFRQMQVRLDTVNRVLREQITGNRVIRAFVKDDYEKERFKGANTELTEVSLGTARLMAL
MFPTVMTVVNVSSIAVVWFGAHRIDSGAMQIGALTAFLSYLMQIVMSVMMATFMFMMVPRAEVCAERIQEVLGTESSVVP
PLEPVRELVRHGHLEIRGAGFKYPGAEASVLRDIALEALPGETTAVIGSTGSGKSTLLGLVPRLFDATGGEVLVDGADVR
QIDPTLLAKTVSLVPQKPYLFSGTVATNLRYGNPDATDEELWHALEVAQAKDFVEKLEGGLDAPIAQGGTNVSGGQRQRL
AIARTLVQRPEIYLFDDSFSALDYATDAALRTALRLETAEATVVIVAQRVSTIRDADRIVVMDEGRVVGTGRHHELMDGN
ETYREIVLSQLTEAEAA

Nucleotide


Download         Length: 1734 bp        

>NTDB_id=678573 OG204_RS10720 WP_250298194.1 2345477..2347210(+) (rcrP) [Streptomyces sp. NBC_01387]
GTGCTCATACAACTCCTGCGGACGTACCTGCGTCCGTACAAGAAACCGATGGCCCTGCTGGCGCTGCTTCAGCTGTTCCA
GACCTGCGCCACCCTCTACCTGCCGACTCTCAACGCGGACATCATTGACAACGGTGTCGTGAAGGGTGACTCGGGTTACA
TCCTGACCTTCGGTGGCGTCATGATCGCCATCAGCGTGGTCCAGGTGATCTGCAACATCGGCGCCGTCTACTTCGGTGCG
CGGACGGCCTCCGCCCTCGGCCGGGACATCCGTGCCGGGGTCTTCGACCGGGTGCAGTCCTTCTCGGCGCGCGAGGTCGG
GCACTTCGGGGCGCCGTCCCTCATCACCCGCACCACCAATGACGTCCAGCAGATCCAGATGCTGGTGCTGATGTCGTTCA
CGCTGATGGCTTCGGCGCCGATCATGTGTGTGGGCGCCATCGTCCTGGCGCTCGGACAGGACGTACCGCTCTCGCTCGTC
CTGGTCGCGGTCCTCCCGGTCATGCTCGTCCTGGTCTCCCTGATCGTCCGGCGCATGCGCCCGCTCTTCCGGCAGATGCA
GGTCCGGCTCGACACGGTGAACCGGGTGCTGCGCGAGCAGATCACCGGCAACCGCGTCATCCGCGCGTTCGTCAAGGACG
ACTACGAGAAGGAGCGCTTCAAGGGCGCCAACACCGAGCTGACCGAGGTCTCCCTGGGGACCGCGCGGCTGATGGCGCTC
ATGTTCCCGACGGTGATGACCGTGGTGAACGTCTCGTCGATCGCGGTGGTCTGGTTCGGCGCGCACCGGATCGACAGCGG
GGCCATGCAGATCGGGGCGCTGACCGCGTTCCTCTCCTATCTGATGCAGATCGTGATGTCCGTGATGATGGCCACCTTCA
TGTTCATGATGGTGCCGCGTGCGGAGGTCTGTGCCGAGCGGATCCAGGAGGTGCTCGGCACCGAGTCCAGCGTGGTGCCG
CCGCTGGAGCCGGTGCGGGAACTGGTCAGGCACGGCCATCTGGAGATCCGGGGGGCCGGTTTCAAGTACCCGGGCGCCGA
GGCTTCGGTGCTGCGGGACATCGCCCTGGAGGCGCTGCCCGGTGAGACGACCGCGGTGATCGGATCGACGGGCAGCGGGA
AGTCGACGCTGCTCGGCCTGGTGCCGCGGCTGTTCGACGCCACCGGCGGCGAGGTGCTGGTGGACGGCGCGGACGTACGG
CAGATCGATCCCACGCTACTGGCGAAGACCGTGTCGCTGGTGCCGCAGAAGCCGTATCTGTTCTCGGGGACCGTCGCGAC
GAACCTGCGGTACGGAAACCCGGACGCGACCGATGAGGAGCTGTGGCACGCGCTGGAGGTCGCGCAGGCCAAGGACTTCG
TGGAGAAGCTGGAGGGCGGGCTGGACGCGCCGATCGCCCAGGGCGGCACCAATGTCTCCGGCGGGCAGCGGCAGCGGCTC
GCGATCGCCAGGACGCTGGTCCAGCGGCCGGAGATCTACCTCTTCGACGACTCCTTCTCGGCACTGGACTACGCGACGGA
CGCGGCGCTGCGGACCGCGCTGCGGCTGGAGACCGCCGAGGCGACCGTGGTGATCGTCGCGCAGCGCGTCTCCACCATCC
GCGACGCGGACCGGATCGTCGTGATGGACGAGGGCCGGGTGGTCGGAACCGGCCGCCATCACGAGTTGATGGACGGCAAT
GAGACATACCGGGAGATCGTGCTCTCCCAGCTGACCGAGGCGGAGGCAGCCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

40.925

100

0.414