Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   MYL34_RS14760 Genome accession   NZ_CP095806
Coordinates   3004970..3005599 (-) Length   209 a.a.
NCBI ID   WP_000839153.1    Uniprot ID   A0A9Q6Y251
Organism   Escherichia coli strain E371     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 2999970..3010599
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MYL34_RS14745 (MYL34_14675) helD 3000212..3002266 (-) 2055 WP_001317751.1 DNA helicase IV -
  MYL34_RS14750 (MYL34_14680) yccF 3002389..3002835 (+) 447 WP_001261236.1 YccF domain-containing protein -
  MYL34_RS14755 (MYL34_14685) yccS 3002845..3005007 (+) 2163 WP_000875041.1 YccS family putative transporter -
  MYL34_RS14760 (MYL34_14690) sxy/tfoX 3004970..3005599 (-) 630 WP_000839153.1 CRP-S regulon transcriptional coactivator Sxy Regulator
  MYL34_RS14765 (MYL34_14695) sulA 3005818..3006327 (+) 510 WP_000288705.1 SOS-induced cell division inhibitor SulA -
  MYL34_RS14770 (MYL34_14700) ompA 3006684..3007724 (+) 1041 WP_001314606.1 porin OmpA -
  MYL34_RS14775 (MYL34_14705) matP 3007800..3008252 (-) 453 WP_000877161.1 macrodomain Ter protein MatP -
  MYL34_RS14780 (MYL34_14710) ycbZ 3008438..3010198 (+) 1761 WP_000156476.1 Lon protease family protein -

Sequence

Protein


Download         Length: 209 a.a.        Molecular weight: 24147.02 Da        Isoelectric Point: 9.2180

>NTDB_id=678561 MYL34_RS14760 WP_000839153.1 3004970..3005599(-) (sxy/tfoX) [Escherichia coli strain E371]
MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLTYKKCGRSVTLN
YYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQN
SLVTEKILFMLEGAIIGIHEAALPVARRQELAEWADSLTPKQEFPAELE

Nucleotide


Download         Length: 630 bp        

>NTDB_id=678561 MYL34_RS14760 WP_000839153.1 3004970..3005599(-) (sxy/tfoX) [Escherichia coli strain E371]
ATGAAAAGCCTCTCCTATAAGCGGATCTATAAATCACAAGAATACCTGGCAACGTTGGGCACAATTGAATACCGATCATT
GTTTGGCAGTTACAGCCTGACCGTTGACGACACGGTGTTTGCGATGGTTTCTGATGGTGAGTTGTATCTTCGGGCTTGTG
AGCAAAGTGCACAGTACTGTGTAAAACATCCGCCTGTCTGGCTGACATATAAAAAGTGTGGCCGATCCGTTACCCTCAAT
TACTATCGGGTTGATGAAAGTCTATGGCGAAATCAACTGAAGCTGGTGCGTCTGTCGAAATATTCTCTCGATGCTGCGCT
GAAAGAGAAAAGCACGCGCAATACCCGGGAAAGACTGAAAGATTTGCCCAATATGTCTTTTCATCTGGAAGCGATTCTCG
GGGAGGTGGGGATTAAGGATGTACGGGCGTTACGTATACTTGGGGCAAAAATGTGTTGGTTGCGACTGCGGCAGCAAAAC
AGTCTGGTGACAGAAAAGATTCTGTTTATGCTTGAAGGGGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACG
CCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGTTTCCTGCGGAACTTGAGTAA

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

100

100

1