Detailed information NTG0678319

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: MYW48_RS27125
• Genome accession: NZ_CP095767
• Coordinates: 5265684..5267033 (-)
• Length: 449 a.a.
• NCBI ID: WP_247727652.1
• Uniprot ID: -
• Organism: Bacillus cereus strain CDHWZ7
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5260684..5272033

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MYW48_RS27105 (MYW48_27105)	secA	5261015..5263522 (-)	2508	WP_000579374.1	preprotein translocase subunit SecA	-
MYW48_RS27110 (MYW48_27110)	raiA	5263792..5264334 (-)	543	WP_000671187.1	ribosome-associated translation inhibitor RaiA	-
MYW48_RS27115 (MYW48_27115)	cspC	5264656..5264853 (-)	198	WP_142398808.1	cold shock protein CspC	-
MYW48_RS27120 (MYW48_27120)	-	5264980..5265684 (-)	705	WP_044783038.1	ComF family protein	-
MYW48_RS27125 (MYW48_27125)	comFA	5265684..5267033 (-)	1350	WP_247727652.1	ATP-dependent helicase ComFA	Machinery gene
MYW48_RS27130 (MYW48_27130)	-	5267160..5268590 (-)	1431	WP_063549061.1	C40 family peptidase	-
MYW48_RS27135 (MYW48_27135)	-	5268739..5269053 (-)	315	WP_000400857.1	helix-turn-helix domain-containing protein	-
MYW48_RS27140 (MYW48_27140)	-	5269226..5270068 (-)	843	WP_000684725.1	DegV family protein	-
MYW48_RS27145 (MYW48_27145)	-	5270305..5270940 (+)	636	WP_000926669.1	YigZ family protein	-

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 51112.00 Da
• Isoelectric Point: 10.0672

>NTDB_id=678319 MYW48_RS27125 WP_247727652.1 5265684..5267033(-) (comFA) [Bacillus cereus strain CDHWZ7]
MLAGKQLLLDELSSDLQRELNDLKRKGEVICVQGVKKKNSKYMCQRCGNVDQRLFASFLCRRCSKVCTYCRKCITMGRVS
ECAVLVRGIAERKREKKLNLLQWNGKLSTGQNLAAQGVVEAIKQKESFFIWAVCGAGKTEMLFYGINEALQKGGRVCIAT
PRTDVVLELAPRLQEVFPYIKVAALYGGSVDKEKDAVLVVATTHQLLRYYRVFHVMVVDEIDAFPYCADQMLQYAVKQAM
KERAARIYLTATPDETWKRKFRKGEQKGVIVSGRYHRHPLPVPLFCWCGNWKKSLIHKRIPRVLLQWLQTYLNKKHPIFL
FVSHVRYIEEISLLLKSLNKRIEGVHAEDPGRKEKVAAFRKGEIPLLVTTTILERGVTVKNLQVAVLGAEEEIFSESALV
QIAGRAGRSFEAPYGEVIYFHYGKTEAMVRAKKHIQGMNKNAKEQGLID

Nucleotide

• Length: 1350 bp

>NTDB_id=678319 MYW48_RS27125 WP_247727652.1 5265684..5267033(-) (comFA) [Bacillus cereus strain CDHWZ7]
ATGCTGGCGGGGAAACAGTTGCTATTAGACGAACTTTCTTCAGATTTACAGAGGGAATTAAATGATTTGAAAAGGAAGGG
AGAGGTCATATGTGTACAAGGTGTAAAAAAGAAGAATTCTAAATATATGTGCCAACGCTGCGGAAATGTAGATCAGCGGC
TATTTGCGTCGTTTTTATGTAGAAGGTGCAGTAAAGTGTGCACATATTGCCGGAAGTGTATAACGATGGGGAGGGTAAGT
GAATGTGCTGTACTTGTTCGCGGGATTGCTGAAAGAAAGAGAGAAAAGAAATTAAACTTGTTACAGTGGAACGGGAAGTT
GTCTACTGGTCAGAATTTGGCGGCACAAGGTGTTGTAGAGGCTATTAAGCAAAAAGAATCATTTTTTATTTGGGCTGTAT
GCGGGGCTGGGAAAACAGAGATGTTGTTTTACGGTATTAACGAAGCGCTTCAAAAAGGAGGAAGAGTTTGTATCGCAACG
CCGAGAACGGATGTTGTTCTGGAATTAGCACCGAGATTACAAGAAGTATTTCCATATATAAAGGTAGCGGCTTTATATGG
AGGGAGTGTGGATAAAGAAAAAGATGCAGTACTAGTCGTTGCGACCACGCATCAATTATTGCGTTATTATAGGGTGTTTC
ATGTCATGGTTGTAGATGAGATAGATGCTTTTCCATATTGTGCAGATCAAATGTTACAGTACGCGGTAAAACAAGCGATG
AAAGAAAGGGCGGCGCGTATTTATTTAACTGCGACTCCAGATGAAACGTGGAAGCGAAAATTTAGAAAAGGTGAACAAAA
AGGCGTTATTGTTTCTGGACGATATCACCGTCATCCTTTACCAGTTCCTTTATTTTGTTGGTGCGGGAATTGGAAAAAAA
GCCTCATTCATAAAAGAATTCCTCGAGTTTTACTACAGTGGTTACAAACATACTTAAATAAAAAACATCCTATTTTTTTA
TTTGTCTCCCATGTGCGATATATAGAAGAGATAAGCCTGTTGTTAAAATCATTAAACAAGCGAATTGAAGGTGTACATGC
AGAAGATCCGGGGAGAAAAGAAAAAGTAGCGGCTTTCAGAAAAGGAGAAATCCCATTATTAGTTACAACGACAATTTTAG
AGCGAGGCGTAACGGTGAAAAATTTGCAAGTAGCGGTTTTAGGGGCTGAAGAAGAAATATTCTCAGAAAGTGCACTCGTA
CAAATTGCGGGCCGAGCAGGGCGGAGCTTTGAAGCACCGTATGGAGAGGTCATTTATTTTCACTATGGTAAGACAGAGGC
GATGGTGCGCGCGAAAAAACATATTCAAGGTATGAATAAAAATGCCAAAGAACAAGGATTGATCGATTAA

Domains

Predicted by InterproScan.

• Helicase conserved C-terminal domain (Helicase_C) (311-408)

• Type III restriction enzyme, res subunit (ResIII) (107-254)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	50.679	98.441	0.499
comFA	Latilactobacillus sakei subsp. sakei 23K	41.206	88.641	0.365