Detailed information NTG0678319

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG741_RS14275
• Genome accession: NZ_CP109530
• Coordinates: 3115220..3116512 (-)
• Length: 430 a.a.
• NCBI ID: WP_328677831.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01410
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 3110220..3121512

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG741_RS14265 (OG741_14255)	-	3111448..3114069 (-)	2622	WP_405597677.1	valine--tRNA ligase	-
OG741_RS14270 (OG741_14260)	-	3114206..3115153 (+)	948	WP_405597680.1	hypothetical protein	-
OG741_RS14275 (OG741_14265)	clpX	3115220..3116512 (-)	1293	WP_328677831.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG741_RS14280 (OG741_14270)	clpP	3116658..3117332 (-)	675	WP_323136031.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG741_RS14285 (OG741_14275)	clpP	3117374..3117991 (-)	618	WP_266476368.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG741_RS14290 (OG741_14280)	tig	3118222..3119619 (-)	1398	WP_405597683.1	trigger factor	-
OG741_RS14305 (OG741_14295)	-	3120239..3120433 (-)	195	WP_266476365.1	hypothetical protein	-

Sequence

Protein

• Length: 430 a.a.
• Molecular weight: 47025.98 Da
• Isoelectric Point: 4.8809

>NTDB_id=678319 OG741_RS14275 WP_328677831.1 3115220..3116512(-) (clpX) [Streptomyces sp. NBC_01410]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGGTGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIESRAGAKGIGFGATIRSKREIEASDQFQEVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLKILVEPRNALVKQYQRLFELDGVELDFDLPALEAIADQAILRGTGARGLRAIMEEVLMSVMYEVPSRKDVARVVIT
ADVVHNNVNPTLVPREPRIVKNDGRHEKSA

Nucleotide

• Length: 1293 bp

>NTDB_id=678319 OG741_RS14275 WP_328677831.1 3115220..3116512(-) (clpX) [Streptomyces sp. NBC_01410]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCAGGCCCGGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAGGAACTCGCCGAGACCT
CCGAGGTGCGGTGGGAGGAACTGCCCAAGCCGCGCGAGATCTACGAGTTCCTCGAGGGGTACGTCGTCGGGCAGGAGCCC
GCGAAGAAGGCCCTCTCGGTAGCGGTCTACAACCACTACAAGCGCGTCCAGGCCGGCGAGAACGGCGGGGGCACGGGCCG
GGACGACGCGATCGAACTGGCCAAGTCGAACATCCTGCTGCTGGGCCCCACCGGGTCCGGCAAGACTCTTCTCGCCCAGA
CCCTGGCCCGGATGCTCAACGTCCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCCGGGTATGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCGGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCTCGTAAGAGTGAAAACCCGTCGATCACCCGTGACGTGTCGGGCGAAGGCGTCCAGCAGGCCC
TGCTGAAGATCCTCGAAGGCACGACGGCCTCGGTCCCGCCCCAGGGCGGACGGAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGTGCCTTCGCGGGCCTGGAGAAGATCATCGAGTCGCGGGCGGGCGC
GAAGGGCATCGGCTTCGGCGCGACGATCCGCTCGAAGCGCGAGATCGAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCGGAGTTCATCGGCCGCCTCCCGGTCATCACCTCGGTCCACAACCTGGACCGC
GAGGCCCTGCTCAAGATCCTGGTCGAGCCGCGCAACGCACTGGTGAAGCAGTACCAGCGCCTGTTCGAACTGGACGGCGT
GGAGCTGGACTTCGACCTCCCGGCCCTGGAGGCGATCGCCGACCAGGCGATCCTGCGCGGCACGGGCGCGCGTGGCCTGC
GGGCCATCATGGAAGAGGTCCTGATGTCGGTGATGTACGAGGTCCCCTCCCGCAAGGACGTCGCACGGGTAGTCATCACG
GCGGACGTGGTGCACAACAACGTGAACCCGACGCTGGTGCCGAGGGAGCCGCGGATCGTGAAGAACGACGGGCGGCACGA
GAAGTCCGCGTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.682	93.488	0.595
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.641	95.814	0.514