Detailed information NTG0678287

Bioinformatically predicted

Overview

• Name: clpC
• Type: Regulator
• Locus tag: MYW48_RS05685
• Genome accession: NZ_CP095767
• Coordinates: 1124406..1127006 (+)
• Length: 866 a.a.
• NCBI ID: WP_074789410.1
• Uniprot ID: A0A9W7PWL8
• Organism: Bacillus cereus strain CDHWZ7
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 1119406..1132006

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MYW48_RS05650 (MYW48_05650)	prsA	1120169..1121026 (-)	858	WP_001214385.1	peptidylprolyl isomerase PrsA	-
MYW48_RS05655 (MYW48_05655)	-	1121156..1121287 (-)	132	WP_001120845.1	DUF3941 domain-containing protein	-
MYW48_RS05660 (MYW48_05660)	-	1121388..1122245 (+)	858	WP_000364447.1	YitT family protein	-
MYW48_RS05665 (MYW48_05665)	-	1122271..1122468 (-)	198	WP_000527408.1	DUF3813 domain-containing protein	-
MYW48_RS05670 (MYW48_05670)	-	1122469..1122609 (-)	141	WP_000516816.1	hypothetical protein	-
MYW48_RS05675 (MYW48_05675)	-	1122715..1123524 (-)	810	WP_001041241.1	Cof-type HAD-IIB family hydrolase	-
MYW48_RS05680 (MYW48_05680)	-	1124015..1124194 (+)	180	WP_000531422.1	YjzC family protein	-
MYW48_RS05685 (MYW48_05685)	clpC	1124406..1127006 (+)	2601	WP_074789410.1	ATP-dependent chaperone ClpB	Regulator
MYW48_RS05690 (MYW48_05690)	-	1127045..1127227 (-)	183	WP_106081472.1	YjzD family protein	-
MYW48_RS05695 (MYW48_05695)	-	1127384..1128118 (+)	735	WP_106081471.1	alpha/beta hydrolase	-
MYW48_RS05700 (MYW48_05700)	-	1128148..1129020 (+)	873	WP_000486171.1	NAD(P)-dependent oxidoreductase	-
MYW48_RS05705 (MYW48_05705)	comZ	1129075..1129251 (+)	177	WP_001003335.1	ComZ family protein	Regulator
MYW48_RS05710 (MYW48_05710)	fabH	1129483..1130415 (+)	933	WP_247727770.1	beta-ketoacyl-ACP synthase III	-
MYW48_RS05715 (MYW48_05715)	fabF	1130447..1131685 (+)	1239	WP_000412645.1	beta-ketoacyl-ACP synthase II	-

Sequence

Protein

• Length: 866 a.a.
• Molecular weight: 97478.43 Da
• Isoelectric Point: 5.1561

>NTDB_id=678287 MYW48_RS05685 WP_074789410.1 1124406..1127006(+) (clpC) [Bacillus cereus strain CDHWZ7]
MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLFTLLEEQDGLAVRIFQKMNVDIEALKQGAESLIKKKPSVTGSGAE
VGKLYITGALQQLLVRAGKEAEKLQDDYISVEHVLLAFSEEKGDINQLFTRFHITKDNLLQSLMTVRGNQRVTSQNPEAT
YEALEKYGRDLVAEVRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEGLKDRTI
FALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEGAMDAGNMLKPMLARGELHCIGATTLD
EYRKYIEKDPALERRFQQVLAEEPTVEDTISILRGLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEA
CATIRTEIDSMPTELDEVTRRIMQLEIEEAALGKETDRGSQERLKTLQRELSDLKEVASGMRAKWEKEKEDIHKVRDLRE
HLERLRRELEEAEGNYDLNKAAELRHGKIPAIEKELKEAEEMGAHNKQENRLLREEVSEEEIADIVSRWTGIPVAKLVEG
EREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDM
SEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVI
IMTSNIGSAHLLDGLEEDGSIKEESRDLVMGQLRGHFRPEFLNRVDEIILFKPLTTNEIKGIVDKIVKELQGRLADRHIT
VELTDAAKEFVVEAGFDPMYGARPLKRYVQRQVETKLARELIAGTITDNSHVVVDVENNELVVHVK

Nucleotide

• Length: 2601 bp

>NTDB_id=678287 MYW48_RS05685 WP_074789410.1 1124406..1127006(+) (clpC) [Bacillus cereus strain CDHWZ7]
ATGGACTTAAATCAAATGACAACAAAAACACAAGAGGCGATTATGAGTGCCCAATCTTTAGCGGTATCTCATCATCATCA
AGAAGTAGATACTGTTCATCTCTTGTTTACATTATTAGAAGAGCAAGATGGGTTAGCAGTGCGTATTTTTCAAAAAATGA
ATGTCGATATAGAAGCGTTAAAGCAAGGCGCCGAAAGTTTAATTAAGAAAAAACCTTCTGTAACGGGAAGCGGTGCAGAA
GTAGGCAAATTATATATAACAGGTGCTCTGCAACAACTACTTGTAAGAGCAGGAAAAGAAGCAGAGAAATTGCAAGATGA
CTACATTTCAGTGGAACATGTATTGCTTGCTTTTTCTGAAGAAAAAGGCGATATCAATCAATTATTTACAAGATTTCATA
TTACGAAAGATAACTTATTACAGTCTTTAATGACAGTTCGGGGGAATCAAAGAGTGACTAGTCAAAATCCAGAAGCAACT
TATGAAGCGTTAGAAAAATATGGCCGTGATTTAGTGGCAGAAGTGAGAGCAGGGAAAATTGATCCTGTTATTGGCCGGGA
TAGTGAAATTCGACGTGTCATTCGCATTCTTTCACGTAAAACGAAAAACAACCCTGTTTTAATTGGTGAGCCAGGTGTTG
GTAAAACAGCAATCGTTGAAGGGTTAGCGCAGCGTATTGTGAAAAAAGATGTACCTGAAGGGCTAAAAGATAGAACGATC
TTCGCGTTAGATATGAGTGCGCTCGTAGCTGGTGCGAAATTCCGTGGTGAGTTCGAAGAGCGTCTGCAAGCTGTATTAAA
TGAAATTAAAAAGAGTGAAGGGCGTATTTTATTATTTATTGATGAACTTCATACAATCGTTGGCGCCGGTAAAACAGAAG
GTGCGATGGATGCAGGGAATATGTTAAAACCGATGCTTGCTCGCGGTGAACTACACTGTATTGGGGCGACGACATTAGAT
GAATATCGTAAATATATTGAGAAAGACCCGGCGTTAGAAAGACGTTTCCAACAAGTATTAGCAGAAGAACCAACTGTTGA
AGATACAATTTCCATTTTACGTGGTTTAAAAGAGCGTTTTGAAATTTATCATGGTGTAAATATTCATGACCGCGCGATTG
TAGCAGCATCAGTTTTATCAGATCGATATATTTCGGACCGTTTCTTACCAGATAAAGCAATTGATCTTGTCGATGAAGCG
TGTGCAACAATTCGTACAGAAATCGATTCTATGCCGACAGAATTAGATGAAGTAACGCGTCGTATTATGCAGTTAGAAAT
TGAGGAAGCAGCTCTTGGAAAAGAAACAGATCGTGGTAGCCAAGAACGTCTTAAAACGTTGCAACGTGAACTATCAGATT
TAAAAGAAGTTGCAAGTGGTATGAGAGCGAAATGGGAGAAAGAAAAAGAAGACATTCACAAAGTTCGTGACTTACGTGAA
CATTTAGAACGTCTGCGCCGTGAATTAGAAGAAGCAGAAGGTAATTACGATTTAAATAAAGCAGCCGAACTTCGTCACGG
GAAAATTCCAGCAATTGAAAAAGAGTTAAAAGAAGCGGAAGAAATGGGCGCGCATAATAAACAAGAAAATCGTTTATTAC
GTGAGGAAGTAAGTGAAGAAGAAATTGCAGATATTGTTTCACGCTGGACTGGTATTCCTGTTGCTAAACTCGTTGAAGGT
GAACGCGAGAAATTACTACGCTTAGAGCAAATCTTATCAGAGCGTGTCATCGGACAAGAGGAAGCAGTAAGCTTAGTATC
AGACGCGGTTCTTCGTGCTCGCGCTGGTATTAAAGATCCGAACCGCCCGATTGGTTCCTTCATTTTCTTAGGCCCTACGG
GTGTTGGTAAAACAGAACTTGCAAAAACGTTAGCGCAGTCTTTATTTGATAGTGAAGAGCAAATGATTCGTATTGATATG
TCTGAGTATATGGAGAAACACGCAGTGTCACGCTTAATTGGTGCACCTCCTGGATATGTAGGATATGAAGAAGGCGGTCA
ATTAACAGAAGCGGTAAGACGTAAACCATATTCCGTTATTTTATTAGATGAAATTGAAAAAGCACATCCAGAAGTATTCA
ACATTTTATTACAAATGTTAGATGATGGACGCATTACAGATTCGCAAGGACGTACAGTGGACTTTAAAAACACAGTTATT
ATTATGACTTCAAATATTGGATCTGCTCATTTACTAGATGGATTAGAAGAAGATGGCTCGATTAAAGAGGAATCAAGAGA
CCTTGTAATGGGGCAATTAAGAGGACATTTCCGCCCTGAATTTTTAAACCGTGTTGATGAAATTATTTTATTTAAACCTC
TTACAACGAATGAAATTAAAGGTATTGTTGATAAAATTGTAAAAGAATTACAAGGGCGTTTAGCTGACCGTCACATTACA
GTAGAATTAACAGACGCAGCAAAAGAATTTGTTGTAGAAGCTGGCTTTGATCCGATGTATGGAGCTCGTCCATTAAAACG
ATACGTACAACGTCAAGTGGAAACGAAATTAGCGCGAGAATTAATTGCAGGAACAATTACTGACAATAGTCACGTAGTTG
TCGATGTAGAAAATAACGAATTAGTTGTTCATGTGAAATAA

Domains

Predicted by InterproScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (602-768)

• ATPase family associated with various cellular activities (AAA) (AAA) (206-339)

• Clp amino terminal domain, pathogenicity island component (Clp_N) (97-148)

• Clp amino terminal domain, pathogenicity island component (Clp_N) (17-68)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (774-854)

• AAA lid domain (AAA_lid_9) (345-447)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpC	Bacillus subtilis subsp. subtilis str. 168	47.657	100	0.482
clpC	Lactococcus lactis subsp. lactis strain DGCC12653	42.039	100	0.424
clpC	Lactococcus lactis subsp. cremoris KW2	47.199	82.448	0.389