Detailed information NTG0678199

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: MXH98_RS16640
• Genome accession: NZ_CP095760
• Coordinates: 3380070..3381233 (-)
• Length: 387 a.a.
• NCBI ID: WP_007407484.1
• Uniprot ID: A3KLC1
• Organism: Bacillus velezensis strain ZK-3
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3375070..3386233

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MXH98_RS16610 (MXH98_16610)	-	3375335..3375754 (-)	420	WP_012118571.1	TIGR03826 family flagellar region protein	-
MXH98_RS16615 (MXH98_16615)	comFC	3375828..3376517 (-)	690	WP_197197403.1	double zinc ribbon domain-containing protein	Machinery gene
MXH98_RS16620 (MXH98_16620)	-	3376523..3376807 (-)	285	WP_007407481.1	competence protein ComFB	-
MXH98_RS16625 (MXH98_16625)	comFA	3376865..3378250 (-)	1386	WP_012118573.1	DEAD/DEAH box helicase	Machinery gene
MXH98_RS16630 (MXH98_16630)	-	3378358..3379206 (-)	849	WP_003151387.1	DegV family protein	-
MXH98_RS16635 (MXH98_16635)	degU	3379304..3379993 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
MXH98_RS16640 (MXH98_16640)	degS	3380070..3381233 (-)	1164	WP_007407484.1	two-component sensor histidine kinase DegS	Regulator
MXH98_RS16645 (MXH98_16645)	-	3381456..3382103 (+)	648	WP_007614107.1	YigZ family protein	-
MXH98_RS16650 (MXH98_16650)	-	3382108..3383328 (+)	1221	WP_012118574.1	LCP family protein	-
MXH98_RS16655 (MXH98_16655)	-	3383427..3384503 (-)	1077	WP_003151382.1	MraY family glycosyltransferase	-
MXH98_RS16660 (MXH98_16660)	-	3384636..3385832 (-)	1197	WP_012118575.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.78 Da
• Isoelectric Point: 6.8616

>NTDB_id=678199 MXH98_RS16640 WP_007407484.1 3380070..3381233(-) (degS) [Bacillus velezensis strain ZK-3]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=678199 MXH98_RS16640 WP_007407484.1 3380070..3381233(-) (degS) [Bacillus velezensis strain ZK-3]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTCGAAGAACTTAAACAGATCAAACAGCAGG
TCTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAACAGCGTGAAAAGCAGCTGCGGGAGCGCAGGGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTGCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTCATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A3KLC1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.584	99.483	0.951