Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG234_RS15315 Genome accession   NZ_CP109513
Coordinates   3433825..3434949 (+) Length   374 a.a.
NCBI ID   WP_026171409.1    Uniprot ID   A0ABY6PU31
Organism   Streptomyces sp. NBC_01420     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3428825..3439949
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG234_RS15300 (OG234_15320) - 3429472..3430254 (+) 783 WP_405763655.1 hypothetical protein -
  OG234_RS15305 (OG234_15325) - 3430268..3432130 (-) 1863 WP_405759731.1 RNA polymerase sigma factor -
  OG234_RS15310 (OG234_15330) radA/sms 3432266..3433678 (+) 1413 WP_018520499.1 DNA repair protein RadA Machinery gene
  OG234_RS15315 (OG234_15335) disA 3433825..3434949 (+) 1125 WP_026171409.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG234_RS15320 (OG234_15340) - 3434999..3435781 (-) 783 WP_405763656.1 hypothetical protein -
  OG234_RS15325 (OG234_15345) - 3436115..3437017 (+) 903 WP_405759732.1 A/G-specific adenine glycosylase -
  OG234_RS15330 (OG234_15350) - 3437334..3437882 (+) 549 WP_018520495.1 SigE family RNA polymerase sigma factor -
  OG234_RS15335 (OG234_15355) - 3437870..3438589 (+) 720 WP_405759733.1 hypothetical protein -
  OG234_RS15340 (OG234_15360) cseB 3438600..3439304 (+) 705 WP_383750620.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40422.37 Da        Isoelectric Point: 5.0161

>NTDB_id=678178 OG234_RS15315 WP_026171409.1 3433825..3434949(+) (disA) [Streptomyces sp. NBC_01420]
MAASDRAASPGKSGQTTGNEALMRASLSAVAPGMALRDGLERILRGNTGGLIVLGMDKTVESMCTGGFVLDVEFTATRLR
ELAKLDGALILDKDMTKILRAGVQLVPDASIPTEETGTRHRTADRVSKQCNFPVVSVSQSMRLIALYVNGERRVLEESAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVAEALTELDSLTHTELLELPVVARALGYSGSPETLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=678178 OG234_RS15315 WP_026171409.1 3433825..3434949(+) (disA) [Streptomyces sp. NBC_01420]
GTGGCAGCCAGCGACCGGGCAGCATCGCCCGGAAAGTCCGGCCAAACCACCGGTAACGAGGCGCTCATGCGCGCCTCGTT
GAGCGCCGTCGCGCCCGGTATGGCCCTGCGGGACGGCCTGGAGCGCATTCTCCGCGGCAACACCGGGGGTCTGATCGTGC
TCGGCATGGACAAGACCGTCGAGTCGATGTGTACCGGCGGCTTCGTGCTGGACGTGGAGTTCACCGCGACCCGGCTGCGG
GAGCTCGCCAAGCTCGACGGGGCTCTGATTCTCGACAAGGACATGACGAAGATCCTGCGGGCCGGCGTGCAGCTGGTCCC
GGACGCGTCGATCCCGACCGAGGAGACCGGCACCCGGCACCGCACGGCGGACCGGGTCTCCAAGCAGTGCAATTTCCCGG
TCGTCTCGGTCTCCCAGTCGATGCGCCTGATCGCGCTGTACGTGAACGGGGAGCGCCGGGTCCTGGAGGAGTCGGCGGCG
ATCCTGTCCCGCGCCAACCAGGCGCTCGCGACGCTGGAGCGGTACAAGCTGCGGCTCGACGAGGTCGCCGGGACGCTCTC
CGCGCTGGAGATCGAGGACCTGGTGACCGTCCGGGACGTGACGGCGGTGGCCCAGCGCCTGGAGATGGTCCGCCGGATCG
CGACGGAGATCGCGGAGTACGTGGTGGAGCTCGGCACCGACGGGCGGCTGCTGTCGCTCCAGCTGGACGAGCTGATCGCG
GGCGTGGAGCCGGAGCGCGAGCTGGTCGTGCGGGACTACGTGCCGGAGCCGACCGCGAAGCGTTCGCGCACGGTGGCGGA
GGCGCTGACCGAGCTGGACTCGCTGACCCACACGGAGCTGCTCGAACTCCCGGTGGTGGCGAGGGCGCTGGGCTACAGCG
GTTCGCCCGAGACGCTGGACTCGGCGGTGTCGCCGCGCGGTTTCCGGCTGCTGGCGAAGGTGCCGCGGTTGCCCGGCGCG
ATCATCGACCGGCTCGTGGAGCACTTCGGCGGTCTGCAGAAGCTGCTCGCGGCGAGCGTGGACGACCTCCAGACGGTGGA
CGGGGTCGGCGAGGCCCGGGCGCGCAGCGTGCGCGAGGGCCTGTCCCGGCTGGCCGAGTCGTCGATCCTCGAACGGTACG
TGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

44.598

96.524

0.43