Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0A   Type   Regulator
Locus tag   MXH81_RS11120 Genome accession   NZ_CP095759
Coordinates   2217599..2218402 (-) Length   267 a.a.
NCBI ID   WP_024422935.1    Uniprot ID   A0AAX0Z9Q1
Organism   Bacillus safensis strain ZK-1     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context


Location: 2212599..2223402
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MXH81_RS11105 (MXH81_11105) - 2214803..2215039 (+) 237 WP_024422931.1 DUF2627 domain-containing protein -
  MXH81_RS11110 (MXH81_11110) - 2215076..2215813 (-) 738 WP_024422932.1 glycerophosphodiester phosphodiesterase -
  MXH81_RS11115 (MXH81_11115) - 2216042..2217142 (-) 1101 WP_024422933.1 Rap family tetratricopeptide repeat protein -
  MXH81_RS11120 (MXH81_11120) spo0A 2217599..2218402 (-) 804 WP_024422935.1 sporulation transcription factor Spo0A Regulator
  MXH81_RS11125 (MXH81_11125) spoIVB 2218688..2219965 (-) 1278 WP_025092993.1 SpoIVB peptidase -
  MXH81_RS11130 (MXH81_11130) recN 2220166..2221899 (-) 1734 WP_024428012.1 DNA repair protein RecN Machinery gene
  MXH81_RS11135 (MXH81_11135) argR 2221933..2222382 (-) 450 WP_024422938.1 transcriptional regulator ArgR -

Sequence


Protein


Download         Length: 267 a.a.        Molecular weight: 29932.46 Da        Isoelectric Point: 6.3918

>NTDB_id=678104 MXH81_RS11120 WP_024422935.1 2217599..2218402(-) (spo0A) [Bacillus safensis strain ZK-1]
MEKIKVCVADDNRELVGLLTEYIEGQEDMEVLGVAYNGQECLTLFKDKEPDVLLLDIIMPHLDGLAVLERLRENNEMTKQ
PSVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNGTQVTHRSSSIQNSVLRNKPEPKRKNLDASITTI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMSKAKPTNSEFIAMVADRLRLEHRAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=678104 MXH81_RS11120 WP_024422935.1 2217599..2218402(-) (spo0A) [Bacillus safensis strain ZK-1]
GTGGAGAAAATTAAAGTGTGTGTAGCTGATGACAATCGAGAGCTTGTTGGCCTTTTGACAGAGTATATTGAGGGACAGGA
AGATATGGAAGTACTTGGCGTGGCGTATAATGGTCAGGAGTGCCTGACATTATTTAAAGATAAAGAGCCCGACGTTCTCC
TCTTAGACATTATTATGCCTCATTTAGACGGTCTTGCTGTACTAGAACGCCTCCGTGAAAACAATGAAATGACAAAACAG
CCAAGTGTGATTATGCTAACGGCATTTGGACAAGAAGATGTCACGAAAAAAGCAGTTGATTTGGGCGCATCCTATTTCAT
TTTAAAGCCATTTGATATGGAAAACCTAGTAGGTCATATTCGTCAAGTCAGTGGAAACGGCACACAAGTTACCCATCGCT
CTTCATCAATCCAAAACAGTGTTCTTCGTAACAAACCTGAACCGAAACGTAAAAACTTAGATGCGAGCATTACGACCATT
ATTCATGAGATTGGCGTGCCCGCTCATATTAAAGGCTATTTATACTTAAGAGAAGCAATTTCTATGGTGTACAATGACAT
TGAGCTTCTCGGAAGCATCACTAAAGTGTTGTACCCAGACATTGCAAAGAAATTTAACACGACTGCCAGCAGGGTAGAAC
GAGCGATTCGTCATGCCATTGAAGTCGCTTGGAGCAGAGGAAACATTGATTCCATTTCCTCACTCTTTGGTTATACTGTC
AGCATGTCAAAAGCGAAGCCAACCAATTCAGAATTTATTGCCATGGTAGCTGATCGTTTGCGATTAGAGCATAGAGCAAG
CTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

88.06

100

0.884