Detailed information    

insolico Bioinformatically predicted

Overview

Name   nucA/comI   Type   Machinery gene
Locus tag   MXH81_RS08615 Genome accession   NZ_CP095759
Coordinates   1737636..1738016 (+) Length   126 a.a.
NCBI ID   WP_247721897.1    Uniprot ID   -
Organism   Bacillus safensis strain ZK-1     
Function   cleavage of dsDNA into ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 1732636..1743016
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MXH81_RS08605 (MXH81_08605) - 1734350..1735258 (+) 909 WP_039178896.1 trypsin-like serine protease -
  MXH81_RS08610 (MXH81_08610) - 1735405..1737411 (+) 2007 WP_216100393.1 glycosyltransferase family 39 protein -
  MXH81_RS08615 (MXH81_08615) nucA/comI 1737636..1738016 (+) 381 WP_247721897.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  MXH81_RS08620 (MXH81_08620) - 1738161..1739009 (+) 849 WP_044335939.1 STAS domain-containing protein -
  MXH81_RS08625 (MXH81_08625) - 1739042..1739584 (-) 543 WP_185854432.1 IseA DL-endopeptidase inhibitor family protein -
  MXH81_RS08630 (MXH81_08630) - 1739879..1740322 (+) 444 WP_044335372.1 hypothetical protein -
  MXH81_RS08635 (MXH81_08635) lexA 1740367..1740987 (-) 621 WP_024427080.1 transcriptional repressor LexA -
  MXH81_RS08640 (MXH81_08640) yneA 1741146..1741457 (+) 312 WP_024425130.1 cell division suppressor protein YneA -
  MXH81_RS08645 (MXH81_08645) - 1741475..1742122 (+) 648 WP_025093247.1 recombinase family protein -
  MXH81_RS08650 (MXH81_08650) - 1742192..1742422 (+) 231 WP_024425132.1 DUF896 domain-containing protein -

Sequence

Protein


Download         Length: 126 a.a.        Molecular weight: 13712.36 Da        Isoelectric Point: 8.5098

>NTDB_id=678102 MXH81_RS08615 WP_247721897.1 1737636..1738016(+) (nucA/comI) [Bacillus safensis strain ZK-1]
MGTLLGGFGEKQAANGANRYDHVVQFPKERYPETGSHIQEAIRKGHSDVCTIDRNGADARRQESLKGIPTKPGFDRDEWP
MAVCLEGGKGASVQYVSPSDNRGAGSWVGHQISGFPDGKRILFIVK

Nucleotide


Download         Length: 381 bp        

>NTDB_id=678102 MXH81_RS08615 WP_247721897.1 1737636..1738016(+) (nucA/comI) [Bacillus safensis strain ZK-1]
ATGGGCACGTTGTTAGGTGGATTTGGAGAGAAGCAGGCAGCAAATGGGGCTAATCGATATGATCATGTCGTTCAATTTCC
AAAGGAAAGGTACCCTGAAACAGGCAGTCATATTCAAGAAGCCATTCGAAAAGGGCATTCAGATGTGTGTACCATTGACC
GAAATGGAGCAGATGCCCGCAGGCAAGAATCATTAAAAGGAATTCCGACAAAACCTGGCTTTGACCGGGATGAATGGCCA
ATGGCAGTTTGTCTTGAGGGAGGAAAAGGCGCAAGCGTACAATATGTCAGTCCATCTGATAATAGGGGAGCAGGCTCATG
GGTCGGGCATCAAATCAGCGGGTTTCCTGATGGGAAAAGAATATTATTCATTGTGAAATAA

Domains

Predicted by InterproScan.

Deoxyribonuclease NucA/NucB (DNase_NucA_NucB)

(29-116)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nucA/comI Bacillus subtilis subsp. subtilis str. 168

57.983

94.444

0.548