Detailed information    

insolico Bioinformatically predicted

Overview

Name   comK   Type   Regulator
Locus tag   MXH81_RS05095 Genome accession   NZ_CP095759
Coordinates   1049185..1049763 (+) Length   192 a.a.
NCBI ID   WP_212052658.1    Uniprot ID   -
Organism   Bacillus safensis strain ZK-1     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1044185..1054763
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MXH81_RS05075 (MXH81_05075) - 1044679..1045974 (-) 1296 WP_024425478.1 globin-coupled sensor protein -
  MXH81_RS05080 (MXH81_05080) - 1046067..1047599 (-) 1533 WP_024426545.1 FAD-dependent oxidoreductase -
  MXH81_RS05085 (MXH81_05085) - 1047742..1048602 (+) 861 WP_024425480.1 SDR family oxidoreductase -
  MXH81_RS05090 (MXH81_05090) - 1048659..1048895 (-) 237 WP_008348804.1 IDEAL domain-containing protein -
  MXH81_RS05095 (MXH81_05095) comK 1049185..1049763 (+) 579 WP_212052658.1 competence protein ComK Regulator
  MXH81_RS05100 (MXH81_05100) - 1050063..1050545 (+) 483 WP_024425482.1 hypothetical protein -
  MXH81_RS05105 (MXH81_05105) - 1050813..1051091 (+) 279 WP_024426542.1 barstar family protein -
  MXH81_RS05110 (MXH81_05110) ceuB 1051253..1052203 (+) 951 WP_024426541.1 ABC transporter permease Machinery gene
  MXH81_RS05115 (MXH81_05115) - 1052196..1053146 (+) 951 WP_024425487.1 iron chelate uptake ABC transporter family permease subunit -
  MXH81_RS05120 (MXH81_05120) - 1053137..1053895 (+) 759 WP_024426539.1 ATP-binding cassette domain-containing protein -

Sequence

Protein


Download         Length: 192 a.a.        Molecular weight: 22320.34 Da        Isoelectric Point: 8.7996

>NTDB_id=678083 MXH81_RS05095 WP_212052658.1 1049185..1049763(+) (comK) [Bacillus safensis strain ZK-1]
MSGISEAPLDSYVINQTTMAVLPVEEGKRVYSKVIERETSFYVELKPLQIIERSCRFFGSSYAGRKAGTYEVTGISHKPP
IVIDSSNHLYFFPTYSSNRPQCGWISHKYIHTFQESSLGDTVVTFTNEQTVKLDVSYKSFESQVHRTAYLRTKFQDRLDG
GLPKKQEFMLYPKEQQLNLVYDFILRELRNRY

Nucleotide


Download         Length: 579 bp        

>NTDB_id=678083 MXH81_RS05095 WP_212052658.1 1049185..1049763(+) (comK) [Bacillus safensis strain ZK-1]
GTGTCAGGAATTAGTGAAGCACCTTTAGATTCATACGTCATTAATCAAACAACAATGGCGGTCCTTCCAGTTGAAGAAGG
AAAAAGAGTATATTCAAAAGTCATAGAAAGAGAGACAAGCTTTTACGTTGAATTAAAGCCCCTGCAAATTATTGAACGCA
GCTGCAGATTCTTCGGCTCAAGCTATGCAGGCAGAAAGGCGGGAACATACGAAGTAACAGGAATATCTCATAAACCTCCA
ATTGTGATTGACTCATCCAATCATCTGTATTTCTTCCCAACTTATTCATCCAACCGTCCTCAGTGCGGCTGGATCTCCCA
CAAATACATTCATACCTTCCAAGAATCATCCCTCGGAGACACGGTGGTCACCTTTACAAATGAGCAAACCGTCAAACTTG
ATGTCTCATATAAATCATTTGAGAGTCAGGTGCACCGGACAGCATATCTCCGAACGAAATTTCAAGATCGTCTTGATGGC
GGTCTTCCGAAGAAACAAGAATTTATGCTGTATCCAAAGGAACAGCAGCTCAATCTCGTATACGATTTTATATTAAGGGA
GCTTCGTAACAGATATTAG

Domains

Predicted by InterproScan.

ComK protein (ComK)

(10-158)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comK Bacillus subtilis subsp. subtilis str. 168

62.5

100

0.625