Detailed information    

insolico Bioinformatically predicted

Overview

Name   comC   Type   Machinery gene
Locus tag   MX663_RS15150 Genome accession   NZ_CP095736
Coordinates   2853741..2854487 (-) Length   248 a.a.
NCBI ID   WP_247470622.1    Uniprot ID   -
Organism   Bacillus subtilis strain N4     
Function   processing and translocation of ComGC; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2848741..2859487
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MX663_RS15125 (MX663_15125) mreC 2849147..2850019 (-) 873 WP_009967915.1 rod shape-determining protein MreC -
  MX663_RS15130 (MX663_15130) mreB 2850050..2851063 (-) 1014 WP_003229650.1 cell shape-determining protein MreB -
  MX663_RS15135 (MX663_15135) radC 2851155..2851850 (-) 696 WP_003246034.1 DNA repair protein RadC -
  MX663_RS15140 (MX663_15140) maf 2851887..2852456 (-) 570 WP_004398496.1 Maf family nucleotide pyrophosphatase -
  MX663_RS15145 (MX663_15145) spoIIB 2852609..2853607 (-) 999 WP_247470619.1 stage II sporulation protein SpoIIB -
  MX663_RS15150 (MX663_15150) comC 2853741..2854487 (-) 747 WP_247470622.1 A24 family peptidase Machinery gene
  MX663_RS15155 (MX663_15155) folC 2854626..2855918 (-) 1293 WP_247470623.1 folylpolyglutamate synthase/dihydrofolate synthase family protein -
  MX663_RS15160 (MX663_15160) valS 2855978..2858620 (-) 2643 WP_046160705.1 valine--tRNA ligase -
  MX663_RS15165 (MX663_15165) - 2859068..2859259 (+) 192 WP_003222590.1 hypothetical protein -

Sequence

Protein


Download         Length: 248 a.a.        Molecular weight: 26437.01 Da        Isoelectric Point: 9.7944

>NTDB_id=677881 MX663_RS15150 WP_247470622.1 2853741..2854487(-) (comC) [Bacillus subtilis strain N4]
MLSILFIFGLILGSFYYTAGCRIPLHLSIIAPRSSCPFCRRTLTPAELIPILSFLFQKGKCKSCGHRISFMYPAAELVTA
CLFAAAGIRFGTSLELFPALVFISLLIIVAVTDIHFMLIPNRILIFFLPFLAAARLISPLDSWYAGLLGAAAGFLFLAVI
AAITHGGVGGGDIKLFAVIGFVLGVKMLAAAFFFSVLIGALYGAAAVLTGRLAKRQPLPFAPAIAAGSILAYLYGDSIIS
FYIKMALG

Nucleotide


Download         Length: 747 bp        

>NTDB_id=677881 MX663_RS15150 WP_247470622.1 2853741..2854487(-) (comC) [Bacillus subtilis strain N4]
ATGCTATCCATTCTTTTTATCTTCGGGCTTATCCTTGGTTCTTTTTACTATACGGCCGGGTGCCGTATCCCCTTACATCT
ATCTATTATTGCGCCCCGTTCATCATGCCCGTTTTGCCGGCGGACATTAACTCCTGCAGAATTAATTCCCATCCTGTCAT
TCCTATTTCAAAAAGGTAAATGTAAAAGCTGCGGGCATAGGATTTCTTTTATGTATCCCGCAGCAGAGCTTGTGACAGCG
TGTTTATTTGCCGCCGCAGGAATACGCTTTGGCACGTCGCTGGAACTGTTTCCCGCTCTGGTGTTTATCTCTCTTCTCAT
TATTGTTGCAGTGACAGATATTCATTTTATGCTGATTCCAAATCGTATATTGATTTTCTTTCTTCCCTTTTTGGCGGCCG
CGAGATTGATTTCTCCGCTTGATTCCTGGTATGCAGGCCTGTTAGGTGCGGCAGCCGGATTTCTATTTCTGGCTGTAATT
GCCGCAATCACCCATGGGGGAGTAGGGGGAGGAGATATTAAATTATTTGCGGTGATTGGCTTTGTGCTTGGTGTGAAAAT
GCTGGCAGCTGCCTTTTTCTTTTCTGTTTTGATAGGTGCATTATATGGAGCGGCAGCCGTTCTGACTGGTAGACTCGCTA
AAAGGCAGCCGCTTCCCTTTGCCCCCGCTATAGCCGCAGGGAGCATTTTAGCCTATTTATACGGTGACTCTATCATTTCT
TTTTATATCAAAATGGCATTGGGCTGA

Domains

Predicted by InterproScan.

Type IV leader peptidase family (Peptidase_A24)

(100-203)

Bacterial Peptidase A24 N-terminal domain (A24_N_bact)

(7-90)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comC Bacillus subtilis subsp. subtilis str. 168

99.194

100

0.992