Detailed information    

insolico Bioinformatically predicted

Overview

Name   recO   Type   Machinery gene
Locus tag   MX663_RS13740 Genome accession   NZ_CP095736
Coordinates   2616919..2617686 (-) Length   255 a.a.
NCBI ID   WP_014477369.1    Uniprot ID   A0A0D1L7G7
Organism   Bacillus subtilis strain N4     
Function   ssDNA annealing; plasmid transformation (predicted from homology)   
DNA processing Homologous recombination

Genomic Context

Location: 2611919..2622686
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MX663_RS13720 (MX663_13720) ppsR 2612094..2612906 (-) 813 WP_003230064.1 pyruvate, water dikinase regulatory protein -
  MX663_RS13725 (MX663_13725) ccpN 2612932..2613570 (-) 639 WP_003237058.1 transcriptional regulator CcpN -
  MX663_RS13730 (MX663_13730) glyS 2613703..2615742 (-) 2040 WP_247470576.1 glycine--tRNA ligase subunit beta -
  MX663_RS13735 (MX663_13735) glyQ 2615735..2616622 (-) 888 WP_003226213.1 glycine--tRNA ligase subunit alpha -
  MX663_RS13740 (MX663_13740) recO 2616919..2617686 (-) 768 WP_014477369.1 DNA repair protein RecO Machinery gene
  MX663_RS13745 (MX663_13745) yqzL 2617723..2617866 (-) 144 WP_003230053.1 YqzL family protein -
  MX663_RS13750 (MX663_13750) era 2618014..2618919 (-) 906 WP_003230051.1 GTPase Era -
  MX663_RS13755 (MX663_13755) cdd 2618900..2619310 (-) 411 WP_003230049.1 cytidine deaminase -
  MX663_RS13760 (MX663_13760) unpK 2619429..2619800 (-) 372 WP_015384119.1 diacylglycerol kinase family protein -
  MX663_RS13765 (MX663_13765) ybeY 2619781..2620254 (-) 474 WP_124058621.1 rRNA maturation RNase YbeY -
  MX663_RS13770 (MX663_13770) pgpH 2620255..2622390 (-) 2136 WP_247470578.1 cyclic-di-AMP phosphodiesterase PgpH -

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 29342.05 Da        Isoelectric Point: 8.3080

>NTDB_id=677873 MX663_RS13740 WP_014477369.1 2616919..2617686(-) (recO) [Bacillus subtilis strain N4]
MLTKCEGIVLRTNDYGETNKIVTLLTREHGKIGVMARGAKKPNSRLSAVSQPFLYGSFLMQKTSGLGTLQQGEMILSMRG
IREDLFLTAYAAYIAELVDRGTEEKKPNPYLFEFILESLKQLNEGTDPDVITFIVQMKMLGVMGLYPELNHCVHCKSQDG
TFHFSVRDNGFICHRCFEKDPYRIPIKPQTARLLRLFYYFDLSRLGNVSLKEETKAELKQVIDLYYEEYSGLYLKSKRFL
DQMESMKHLMGENKS

Nucleotide


Download         Length: 768 bp        

>NTDB_id=677873 MX663_RS13740 WP_014477369.1 2616919..2617686(-) (recO) [Bacillus subtilis strain N4]
ATGCTGACAAAATGTGAAGGAATCGTTCTTCGCACAAATGATTACGGAGAGACGAATAAAATCGTAACTTTACTGACAAG
AGAACACGGAAAAATAGGTGTTATGGCACGAGGCGCCAAAAAACCGAACAGCCGTTTATCAGCAGTCAGCCAGCCCTTTT
TGTATGGTTCTTTCTTAATGCAAAAAACATCGGGCCTCGGAACGCTTCAGCAGGGGGAAATGATCCTCAGCATGAGAGGC
ATCAGGGAAGACTTGTTTTTAACAGCATATGCTGCCTATATTGCTGAGTTAGTCGACAGAGGCACAGAAGAAAAAAAGCC
AAATCCTTATTTATTTGAATTCATATTAGAGTCATTAAAACAGCTGAATGAAGGAACAGATCCGGATGTTATCACCTTCA
TTGTTCAAATGAAGATGCTCGGTGTCATGGGCCTGTATCCTGAGCTAAATCATTGTGTACATTGTAAAAGCCAAGACGGA
ACCTTTCATTTCTCTGTTCGTGATAATGGTTTTATATGCCACCGCTGTTTTGAAAAAGATCCTTACAGGATACCGATCAA
ACCGCAAACGGCAAGGCTGTTAAGACTCTTTTACTATTTTGATCTGTCGAGGCTCGGCAATGTGTCCTTAAAAGAGGAAA
CAAAAGCTGAATTAAAGCAAGTGATTGATTTATATTACGAAGAATATTCGGGATTGTATTTAAAATCAAAGCGCTTTTTA
GATCAAATGGAAAGCATGAAACATCTTATGGGTGAAAACAAAAGTTGA

Domains

Predicted by InterproScan.

Recombination protein O N terminal (RecO_N)

(1-75)

Recombination protein O C terminal (RecO_C)

(82-237)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0D1L7G7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recO Bacillus subtilis subsp. subtilis str. 168

99.608

100

0.996