Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   MX663_RS13215 Genome accession   NZ_CP095736
Coordinates   2527030..2527833 (-) Length   267 a.a.
NCBI ID   WP_003226427.1    Uniprot ID   -
Organism   Bacillus subtilis strain N4     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 2522030..2532833
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MX663_RS13190 (MX663_13190) glpQ 2523169..2523900 (-) 732 WP_015714234.1 glycerophosphodiester phosphodiesterase -
  MX663_RS13195 (MX663_13195) yqiI 2523979..2524599 (-) 621 WP_131227604.1 N-acetylmuramoyl-L-alanine amidase -
  MX663_RS13200 (MX663_13200) - 2524619..2524915 (-) 297 WP_014480225.1 hypothetical protein -
  MX663_RS13205 (MX663_13205) - 2525223..2525375 (+) 153 WP_014480226.1 hypothetical protein -
  MX663_RS13210 (MX663_13210) yqiG 2525448..2526566 (+) 1119 WP_131227606.1 NADH-dependent flavin oxidoreductase -
  MX663_RS13215 (MX663_13215) spo0A 2527030..2527833 (-) 804 WP_003226427.1 sporulation transcription factor Spo0A Regulator
  MX663_RS13220 (MX663_13220) spoIVB 2528109..2529389 (-) 1281 WP_086344063.1 SpoIVB peptidase -
  MX663_RS13225 (MX663_13225) recN 2529564..2531294 (-) 1731 WP_029317928.1 DNA repair protein RecN Machinery gene
  MX663_RS13230 (MX663_13230) argR 2531331..2531780 (-) 450 WP_003230265.1 arginine repressor ArgR -
  MX663_RS13235 (MX663_13235) yqxC 2531878..2532723 (-) 846 WP_003230264.1 TlyA family RNA methyltransferase -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29691.19 Da        Isoelectric Point: 6.3913

>NTDB_id=677862 MX663_RS13215 WP_003226427.1 2527030..2527833(-) (spo0A) [Bacillus subtilis strain N4]
MEKIKVCVADDNRELVSLLSEYIEGQEDMEVIGVAYNGQECLSLFKEKDPDVLVLDIIMPHLDGLAVLERLRESDLKKQP
NVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNASSVTHRAPSSQSSIIRSSQPEPKKKNLDASITSI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMTKAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=677862 MX663_RS13215 WP_003226427.1 2527030..2527833(-) (spo0A) [Bacillus subtilis strain N4]
GTGGAGAAAATTAAAGTTTGTGTTGCTGATGATAATCGAGAGCTGGTAAGCCTGTTAAGTGAATATATAGAAGGACAGGA
AGACATGGAAGTGATCGGCGTTGCTTATAACGGACAGGAATGCCTGTCGCTGTTTAAAGAAAAAGATCCCGATGTGCTCG
TATTAGATATTATTATGCCGCATTTAGACGGACTTGCGGTTTTAGAGAGGCTGAGGGAATCAGATCTGAAAAAACAGCCG
AATGTCATTATGCTGACAGCCTTTGGGCAGGAAGATGTCACGAAAAAGGCCGTCGATTTAGGCGCGTCCTACTTTATTCT
CAAACCGTTTGATATGGAAAACCTTGTCGGCCATATCCGCCAGGTCAGCGGAAATGCCAGCAGTGTGACGCATCGTGCGC
CATCATCTCAAAGCAGTATTATACGCAGCAGCCAGCCTGAACCAAAGAAGAAAAATCTCGACGCGAGCATCACAAGCATT
ATCCATGAAATCGGCGTCCCAGCCCATATTAAAGGCTATCTCTATCTGCGCGAAGCAATCTCAATGGTATACAATGACAT
CGAATTGCTCGGCAGCATTACAAAAGTCCTCTATCCGGACATCGCCAAAAAATTTAACACAACCGCAAGCCGTGTAGAAA
GAGCGATCCGTCATGCAATTGAAGTGGCATGGAGCAGAGGAAACATTGATTCCATTTCCTCGTTGTTCGGTTATACTGTC
AGCATGACAAAAGCTAAACCGACAAATTCGGAATTCATTGCAATGGTTGCGGATAAGCTGAGATTAGAACATAAGGCTTC
TTAA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(157-260)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

100

100

1