Detailed information    

insolico Bioinformatically predicted

Overview

Name   abrB   Type   Regulator
Locus tag   MX663_RS07890 Genome accession   NZ_CP095736
Coordinates   1506544..1506822 (+) Length   92 a.a.
NCBI ID   WP_003244728.1    Uniprot ID   A0A199WGU6
Organism   Bacillus subtilis strain N4     
Function   repression of comK; repression of rok (predicted from homology)   
Competence regulation

Genomic Context

Location: 1501544..1511822
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MX663_RS07870 (MX663_07870) - 1502732..1503643 (+) 912 WP_247471611.1 2-dehydropantoate 2-reductase -
  MX663_RS07875 (MX663_07875) ampS 1503677..1504909 (-) 1233 WP_003232341.1 aminopeptidase -
  MX663_RS07880 (MX663_07880) ykpC 1505018..1505152 (-) 135 WP_003238865.1 protein YkpC -
  MX663_RS07885 (MX663_07885) mreBH 1505253..1506260 (-) 1008 WP_003245743.1 cell shape-determining protein MreBH -
  MX663_RS07890 (MX663_07890) abrB 1506544..1506822 (+) 279 WP_003244728.1 transcriptional regulator AbhA Regulator
  MX663_RS07895 (MX663_07895) kinC 1507012..1508298 (+) 1287 WP_003232333.1 two-component sensor histidine kinase KinC -
  MX663_RS07900 (MX663_07900) ykqA 1508314..1509141 (+) 828 WP_247471613.1 gamma-glutamylcyclotransferase -
  MX663_RS07905 (MX663_07905) ktrC 1509204..1509869 (+) 666 WP_003222311.1 Ktr system potassium transporter KtrC -
  MX663_RS07910 (MX663_07910) ade 1510025..1511758 (+) 1734 WP_247471615.1 adenine deaminase -

Sequence

Protein


Download         Length: 92 a.a.        Molecular weight: 10256.07 Da        Isoelectric Point: 5.8808

>NTDB_id=677854 MX663_RS07890 WP_003244728.1 1506544..1506822(+) (abrB) [Bacillus subtilis strain N4]
MKSIGVVRKVDELGRIVMPIELRRALDIAIKDSIEFFVDGDKIILKKYKPHGVCLMTGEITSENKEYGNGKITLSPEGAQ
LLLEEIQAALKE

Nucleotide


Download         Length: 279 bp        

>NTDB_id=677854 MX663_RS07890 WP_003244728.1 1506544..1506822(+) (abrB) [Bacillus subtilis strain N4]
ATGAAATCAATAGGTGTTGTGAGAAAAGTAGATGAATTAGGCCGCATTGTCATGCCGATTGAGTTGAGACGGGCATTGGA
TATTGCCATAAAAGACAGCATTGAGTTTTTTGTTGACGGAGATAAAATTATCTTGAAAAAGTACAAACCTCATGGCGTTT
GTTTAATGACTGGAGAAATCACTTCAGAAAATAAAGAATACGGCAACGGTAAAATTACGCTAAGCCCTGAGGGTGCACAG
CTGCTTCTCGAAGAAATTCAAGCCGCTTTAAAAGAATAA

Domains

Predicted by InterproScan.

AbrB C-terminal domain (AbrB_C)

(53-88)

Antidote-toxin recognition MazE, bacterial antitoxin (MazE_antitoxin)

(8-51)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WGU6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  abrB Bacillus subtilis subsp. subtilis str. 168

58.242

98.913

0.576