Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   MX663_RS07770 Genome accession   NZ_CP095736
Coordinates   1482471..1483046 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis strain N4     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1477471..1488046
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MX663_RS07740 (MX663_07740) dapD 1477657..1478367 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  MX663_RS07745 (MX663_07745) dapI 1478437..1479561 (+) 1125 WP_038428899.1 N-acetyldiaminopimelate deacetylase -
  MX663_RS07750 (MX663_07750) ykuS 1479623..1479868 (+) 246 WP_003232382.1 YkuS family protein -
  MX663_RS07755 (MX663_07755) mscT 1479905..1480708 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  MX663_RS07760 (MX663_07760) ahpA 1480945..1481487 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  MX663_RS07765 (MX663_07765) ykuV 1481559..1482005 (+) 447 WP_247471603.1 thiol-disulfide oxidoreductase YkuV -
  MX663_RS07770 (MX663_07770) rok 1482471..1483046 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  MX663_RS07775 (MX663_07775) cse15 1483087..1484052 (-) 966 WP_048654871.1 spore protein Cse15 -
  MX663_RS07780 (MX663_07780) mobA 1484189..1484788 (+) 600 WP_003232376.1 molybdenum cofactor guanylyltransferase -
  MX663_RS07785 (MX663_07785) moeB 1484839..1485858 (+) 1020 WP_247471604.1 molybdopterin-synthase adenylyltransferase MoeB -
  MX663_RS07790 (MX663_07790) glp 1485876..1487168 (+) 1293 WP_144453916.1 gephyrin-like molybdotransferase Glp -
  MX663_RS07795 (MX663_07795) mobB 1487129..1487650 (+) 522 WP_003232370.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=677853 MX663_RS07770 WP_003232378.1 1482471..1483046(+) (rok) [Bacillus subtilis strain N4]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=677853 MX663_RS07770 WP_003232378.1 1482471..1483046(+) (rok) [Bacillus subtilis strain N4]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACATTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1