Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   MX663_RS07670 Genome accession   NZ_CP095736
Coordinates   1466592..1467056 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis strain N4     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1461592..1472056
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MX663_RS07650 (MX663_07650) kinA 1462059..1463879 (+) 1821 WP_015252197.1 sporulation histidine kinase KinA -
  MX663_RS07655 (MX663_07655) dapX 1463889..1465070 (-) 1182 WP_121591741.1 aminotransferase A -
  MX663_RS07660 (MX663_07660) - 1465272..1465433 (-) 162 WP_003245246.1 hypothetical protein -
  MX663_RS07665 (MX663_07665) cheV 1465637..1466548 (+) 912 WP_014476655.1 chemotaxis protein CheV -
  MX663_RS07670 (MX663_07670) kre 1466592..1467056 (-) 465 WP_003232406.1 YkyB family protein Regulator
  MX663_RS07675 (MX663_07675) ykuC 1467182..1468474 (-) 1293 WP_015252195.1 MFS transporter -
  MX663_RS07680 (MX663_07680) ltdD 1468550..1469044 (-) 495 WP_072174092.1 L,D-transpeptidase family protein -
  MX663_RS07685 (MX663_07685) ppeE 1469101..1469961 (-) 861 WP_003232400.1 metallophosphoesterase -
  MX663_RS07690 (MX663_07690) fadH 1470104..1470868 (+) 765 WP_003232398.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=677852 MX663_RS07670 WP_003232406.1 1466592..1467056(-) (kre) [Bacillus subtilis strain N4]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=677852 MX663_RS07670 WP_003232406.1 1466592..1467056(-) (kre) [Bacillus subtilis strain N4]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAGCCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1