Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   MX663_RS06295 Genome accession   NZ_CP095736
Coordinates   1219282..1220433 (+) Length   383 a.a.
NCBI ID   WP_282614125.1    Uniprot ID   -
Organism   Bacillus subtilis strain N4     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 1214282..1225433
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MX663_RS06260 (MX663_06260) yjbB 1214954..1216171 (+) 1218 WP_247471861.1 MFS transporter -
  MX663_RS06265 (MX663_06265) yjbC 1216335..1216913 (+) 579 WP_003224597.1 GNAT family N-acetyltransferase -
  MX663_RS06270 (MX663_06270) spx 1217094..1217489 (+) 396 WP_014476435.1 transcriptional regulator Spx -
  MX663_RS06275 (MX663_06275) yjbE 1217532..1218188 (-) 657 WP_003232944.1 TerC family protein -
  MX663_RS06280 (MX663_06280) - 1218358..1218498 (+) 141 WP_119122854.1 hypothetical protein -
  MX663_RS06285 (MX663_06285) mecA 1218465..1219121 (+) 657 WP_003239278.1 adaptor protein MecA Regulator
  MX663_RS06290 (MX663_06290) - 1219116..1219238 (-) 123 WP_021479547.1 hypothetical protein -
  MX663_RS06295 (MX663_06295) coiA 1219282..1220433 (+) 1152 WP_282614125.1 competence protein CoiA Machinery gene
  MX663_RS06300 (MX663_06300) pepF 1220663..1222492 (+) 1830 WP_003245178.1 oligoendopeptidase F -
  MX663_RS06305 (MX663_06305) - 1222530..1222697 (-) 168 WP_003244944.1 hypothetical protein -
  MX663_RS06310 (MX663_06310) spxH 1223012..1223911 (-) 900 WP_003245184.1 protease adaptor protein SpxH -
  MX663_RS06315 (MX663_06315) yjbI 1223908..1224306 (-) 399 WP_003232928.1 group 2 truncated hemoglobin YjbI -
  MX663_RS06320 (MX663_06320) cwlQ 1224558..1225292 (-) 735 WP_282614126.1 bifunctional muramidase/murein lytic transglycosylase -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 44889.99 Da        Isoelectric Point: 9.9164

>NTDB_id=677848 MX663_RS06295 WP_282614125.1 1219282..1220433(+) (coiA) [Bacillus subtilis strain N4]
MFSAVTEDGQMFHLLGAQQNQKLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCSIDIEPESAYHLEGKRQLYVWLK
TQRASPILEPYIRTINQRPDVMARIKGHMLAVEYQCATIAPDVFQKRTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSAF
HWQFINASPYRELICYCPERRSYLRLSHIIPFYTNHSYSSVQTIPIHRAGVDDLFFTEPKPSIQYSGWTKAIHRFRHKPH
RFNSKETNRLRLLFYEKRQTPFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGDKRAPIRFSAVLQQCKLHIHNK
NIALRFECSEECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAGGIHSMQDLIERDRSCFIE

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=677848 MX663_RS06295 WP_282614125.1 1219282..1220433(+) (coiA) [Bacillus subtilis strain N4]
TTGTTTAGTGCTGTGACTGAAGACGGCCAAATGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCGGAGACG
GTTCTTCTGTCCGGTATGCGGGGGAGAGCTAGCTGTGAAGCTCGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGA
ACAAATCCTGCTCCATAGACATCGAACCGGAAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAA
ACGCAACGGGCTTCACCAATATTGGAGCCGTATATAAGGACAATCAACCAAAGACCGGACGTCATGGCAAGAATCAAGGG
GCATATGCTTGCTGTTGAATATCAATGCGCCACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAG
AAGGAATCATCCCGCAGTGGATTATGGGATACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAGCTTTT
CATTGGCAGTTTATCAATGCAAGTCCATACAGAGAGCTGATATGTTATTGTCCTGAAAGGCGTTCTTATCTCCGGCTCAG
CCACATCATTCCATTCTACACAAACCATTCTTATTCCTCAGTCCAAACGATCCCTATCCATCGGGCAGGTGTAGACGATC
TTTTTTTCACTGAACCGAAACCCTCAATTCAATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCAT
CGGTTTAACTCAAAGGAAACAAATCGCCTTAGGCTGCTGTTTTATGAGAAGCGGCAGACGCCTTTTTCTTTTCTGCCGAC
TGAAGTGTTTGTTCCTGTTAGAAAAGGGGCAGTTTTTAAGAGTCCGGTTTTTGTGTGGCAGGGGTTTCTTTATTTGTTTA
TGACGGATCTTGGAGATAAACGTGCGCCAATTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAATAAG
AACATTGCACTCAGGTTCGAATGCAGCGAAGAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAA
GGGATTTTTAAGGGAGACTCAGAAAGAAGTATATGTGCTGAATCAGCCTGCAGGCGGCATACACTCCATGCAGGATCTCA
TAGAAAGAGACCGCAGCTGTTTTATAGAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

97.855

97.389

0.953