Detailed information    

insolico Bioinformatically predicted

Overview


Name   rcrP   Type   Regulator
Locus tag   OG769_RS25010 Genome accession   NZ_CP109492
Coordinates   5746466..5748199 (-) Length   577 a.a.
NCBI ID   WP_329198870.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01435     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context


Location: 5741466..5753199
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG769_RS25000 (OG769_24980) - 5743378..5744472 (+) 1095 WP_329198866.1 RNA polymerase sigma factor -
  OG769_RS25005 (OG769_24985) rcrQ 5744535..5746466 (-) 1932 WP_329198868.1 ABC transporter ATP-binding protein Regulator
  OG769_RS25010 (OG769_24990) rcrP 5746466..5748199 (-) 1734 WP_329198870.1 ABC transporter ATP-binding protein Regulator
  OG769_RS25015 (OG769_24995) - 5748368..5749813 (-) 1446 WP_093542752.1 FGGY family carbohydrate kinase -
  OG769_RS25020 (OG769_25000) - 5749887..5750192 (-) 306 WP_329202731.1 YtxH domain-containing protein -

Sequence


Protein


Download         Length: 577 a.a.        Molecular weight: 62761.99 Da        Isoelectric Point: 6.1962

>NTDB_id=677755 OG769_RS25010 WP_329198870.1 5746466..5748199(-) (rcrP) [Streptomyces sp. NBC_01435]
MLIKLLRAYLGPYRKPILLLVFLQLLQTCASLYLPTLNADIIDNGVVKGDTGYILEFGGIMIAVSIGQVVCNMGAVYYGA
RTASALGRDVRASVFDRVQSFSAREVGRFGAPSLITRTTNDVQQVQMLVLMTFTLMVSAPIMCVGGIIMALGQDVPLSAV
LLAVVPVLGIAVSLIVKRMRPLFRTMQERLDTVNRVLREQITGNRVIRAFVRDGYEEKRFRGSNTELTDVALSTGRLMAL
MFPTVMTVVNVSSIAVLWFGAHRIDSGGMEIGALTAFLAYLMQIVMSVMMATFMFMMVPRAEVCAERIQEVLETESSVVP
PVKPVRKLLARGHLEVRGADFRYPGAEEPVLRAVDLVARPGETTAIIGSTGSGKSTLLGLVPRLFDVTDGQVLVDGTDVR
TLEPTLLAKTVSLVPQKPYLFSGTVATNLRYGNPDATDEELWHALEVAQAKEFVTALEHGLNAPISQGGTNVSGGQRQRL
AIARTLVQRPEIYLFDDSFSALDYATDAALRGALSHETSEATVVIVAQRVSTIRDADRILVLDEGRVVGAGTHHELMDGN
ETYREIVLSQLTEAEAA

Nucleotide


Download         Length: 1734 bp        

>NTDB_id=677755 OG769_RS25010 WP_329198870.1 5746466..5748199(-) (rcrP) [Streptomyces sp. NBC_01435]
GTGCTCATAAAACTCCTGCGGGCCTATCTCGGTCCGTACAGAAAACCCATCCTGCTGCTGGTCTTCCTCCAACTGCTGCA
GACCTGCGCCAGCCTCTACCTCCCCACCCTGAACGCCGACATCATCGACAACGGTGTCGTGAAGGGGGACACGGGCTACA
TCCTGGAATTCGGCGGCATCATGATCGCCGTCAGCATCGGCCAGGTGGTCTGCAACATGGGAGCCGTCTACTACGGCGCC
CGTACCGCCTCCGCGCTCGGCCGCGACGTCCGGGCGTCGGTCTTCGACCGGGTGCAGTCGTTCTCGGCACGTGAGGTCGG
ACGCTTCGGGGCGCCCTCGCTGATCACCCGTACGACCAATGACGTCCAGCAGGTCCAGATGCTGGTGCTGATGACGTTCA
CGCTGATGGTGTCGGCCCCCATCATGTGCGTCGGCGGCATCATCATGGCGCTCGGCCAGGACGTGCCGCTCTCGGCGGTG
CTGCTCGCGGTGGTGCCGGTGCTCGGCATCGCGGTGAGCCTGATCGTCAAGCGGATGCGGCCGCTGTTCCGCACGATGCA
GGAGCGACTCGACACGGTGAACCGGGTGCTGCGCGAGCAGATCACCGGCAACCGGGTCATCCGCGCCTTCGTCCGCGACG
GCTACGAGGAGAAGCGGTTCCGCGGCTCCAACACCGAGCTGACGGACGTGGCGCTGTCCACGGGCCGGCTGATGGCGCTG
ATGTTCCCCACCGTGATGACGGTCGTGAACGTCTCCTCGATCGCCGTGCTCTGGTTCGGTGCCCACCGCATCGACAGCGG
CGGCATGGAGATCGGCGCGCTGACCGCCTTCCTCGCCTATCTGATGCAGATCGTCATGTCGGTGATGATGGCGACCTTCA
TGTTCATGATGGTGCCGCGCGCCGAGGTCTGCGCAGAGCGCATCCAGGAGGTCCTGGAGACCGAGTCCAGCGTGGTCCCG
CCCGTCAAGCCGGTCCGCAAGCTGCTCGCCCGCGGTCACCTGGAGGTGCGCGGCGCGGACTTCCGCTACCCGGGCGCCGA
GGAACCGGTGCTGCGGGCGGTGGATCTGGTGGCCCGCCCCGGCGAGACCACCGCGATCATCGGTTCGACGGGCAGCGGGA
AGTCGACGCTGCTCGGTCTCGTACCCCGGCTGTTCGACGTGACGGACGGCCAGGTGCTGGTCGACGGCACGGATGTGCGG
ACGCTGGAACCGACGCTGCTGGCGAAGACCGTGAGCCTGGTGCCGCAGAAGCCGTATCTGTTCTCCGGGACGGTCGCGAC
GAACCTGCGGTACGGAAACCCGGACGCGACGGACGAGGAGCTGTGGCACGCGCTGGAGGTCGCGCAGGCCAAGGAGTTCG
TCACCGCGCTGGAGCACGGTCTGAACGCGCCGATCTCGCAGGGCGGCACCAATGTCTCGGGCGGGCAGCGGCAGCGGCTG
GCCATCGCCAGGACGCTGGTGCAGCGGCCGGAGATCTATCTCTTCGACGACTCGTTCTCCGCGCTCGACTACGCCACCGA
CGCCGCGCTGCGCGGGGCGCTCTCGCACGAGACGTCCGAGGCGACCGTGGTGATCGTGGCGCAGCGGGTGTCGACCATCC
GCGACGCGGACCGCATCCTGGTGCTGGACGAGGGCCGGGTCGTCGGCGCCGGCACCCATCACGAGCTGATGGACGGCAAT
GAAACGTACCGGGAGATCGTGCTCTCCCAGCTGACGGAAGCGGAGGCCGCGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

40.21

99.133

0.399