Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   OG574_RS15870 Genome accession   NZ_CP109485
Coordinates   3487709..3488494 (+) Length   261 a.a.
NCBI ID   WP_100591111.1    Uniprot ID   A0ABV4SX88
Organism   Streptomyces sp. NBC_01445     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 3482709..3493494
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG574_RS15855 (OG574_15840) - 3483005..3483532 (+) 528 WP_326773779.1 TerD family protein -
  OG574_RS15860 (OG574_15845) - 3483610..3486510 (-) 2901 WP_326773780.1 vitamin B12-dependent ribonucleotide reductase -
  OG574_RS15865 (OG574_15850) nrdR 3486647..3487192 (-) 546 WP_326773781.1 transcriptional regulator NrdR -
  OG574_RS15870 (OG574_15855) dinR/lexA 3487709..3488494 (+) 786 WP_100591111.1 transcriptional repressor LexA Regulator
  OG574_RS15875 (OG574_15860) - 3488693..3490675 (-) 1983 WP_326773782.1 ATP-dependent DNA helicase -
  OG574_RS15880 (OG574_15865) - 3490716..3492686 (-) 1971 WP_326773783.1 IucA/IucC family siderophore biosynthesis protein -

Sequence

Protein


Download         Length: 261 a.a.        Molecular weight: 28153.94 Da        Isoelectric Point: 7.4237

>NTDB_id=677459 OG574_RS15870 WP_100591111.1 3487709..3488494(+) (dinR/lexA) [Streptomyces sp. NBC_01445]
MTTTADSATITAQDRSQGRLEPVHAMNDASMSAEGPKPARSLPGRPPGIRADSSGLTDRQRRVIEVIRDSVQRRGYPPSM
REIGQAVGLSSTSSVAHQLMALERKGFLRRDPHRPRAYEVRGSDQPSAQPTDTAGKPAASYVPLVGRIAAGGPILAEESV
EDVFPLPRQLVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLEGEATVKRFKREDGHVWLLPHNSAY
QPIPGDEATILGKVVAVLRRV

Nucleotide


Download         Length: 786 bp        

>NTDB_id=677459 OG574_RS15870 WP_100591111.1 3487709..3488494(+) (dinR/lexA) [Streptomyces sp. NBC_01445]
GTGACCACCACCGCAGACAGCGCCACCATCACTGCCCAGGACCGTTCCCAGGGCCGACTCGAGCCGGTGCATGCCATGAA
TGACGCATCCATGAGCGCGGAGGGGCCGAAGCCCGCGCGCTCCTTGCCGGGCCGACCTCCCGGAATCCGCGCGGACAGCT
CGGGGCTCACGGACAGGCAGCGCCGCGTCATCGAGGTGATCAGGGACTCCGTGCAGCGGCGTGGTTACCCGCCGTCGATG
CGGGAGATCGGTCAGGCGGTGGGCCTGTCGAGCACGTCGTCGGTCGCGCACCAGCTGATGGCCCTCGAGCGCAAGGGCTT
CCTGCGCCGGGACCCGCACCGCCCCCGCGCCTACGAGGTCCGCGGGTCCGACCAGCCGAGCGCGCAGCCCACGGACACCG
CGGGCAAGCCGGCCGCGTCGTACGTCCCGCTCGTCGGCCGCATCGCCGCCGGTGGCCCGATCCTCGCCGAAGAGTCCGTC
GAGGACGTGTTCCCCCTCCCCCGGCAGCTGGTCGGAGACGGTGAGCTGTTCGTCCTGAAGGTCGTCGGCGACTCGATGAT
CGAGGCCGCGATCTGCGACGGCGACTGGGTCACGGTCCGCCGCCAGCCGGTCGCGGAGAACGGCGACATCGTCGCCGCGA
TGCTCGAGGGCGAGGCCACCGTCAAGCGCTTCAAGCGCGAGGACGGCCATGTGTGGCTGCTGCCGCACAACTCCGCGTAC
CAGCCGATCCCCGGTGACGAGGCGACCATTCTCGGCAAGGTGGTGGCCGTTCTGCGGCGGGTGTGA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(54-117)

Peptidase S24-like (Peptidase_S24)

(143-255)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

46.226

81.226

0.375