Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG568_RS23290 Genome accession   NZ_CP109480
Coordinates   5211401..5212525 (+) Length   374 a.a.
NCBI ID   WP_266584576.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01450     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 5206401..5217525
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG568_RS23275 (OG568_23310) - 5207017..5207877 (+) 861 WP_329532973.1 hypothetical protein -
  OG568_RS23280 (OG568_23315) - 5207929..5209707 (-) 1779 WP_329532974.1 hypothetical protein -
  OG568_RS23285 (OG568_23320) radA/sms 5209912..5211321 (+) 1410 WP_266437784.1 DNA repair protein RadA Machinery gene
  OG568_RS23290 (OG568_23325) disA 5211401..5212525 (+) 1125 WP_266584576.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG568_RS23295 (OG568_23330) - 5212627..5213436 (-) 810 WP_329532975.1 hypothetical protein -
  OG568_RS23300 (OG568_23335) - 5214066..5214989 (+) 924 WP_329532976.1 A/G-specific adenine glycosylase -
  OG568_RS23305 (OG568_23340) - 5215261..5215800 (+) 540 WP_060898668.1 SigE family RNA polymerase sigma factor -
  OG568_RS23310 (OG568_23345) - 5215821..5216438 (+) 618 WP_329536422.1 hypothetical protein -
  OG568_RS23315 (OG568_23350) cseB 5216458..5217162 (+) 705 WP_266627242.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40079.84 Da        Isoelectric Point: 5.0897

>NTDB_id=677396 OG568_RS23290 WP_266584576.1 5211401..5212525(+) (disA) [Streptomyces sp. NBC_01450]
MAANDRAAAPGKSGGSSGADGLMRASLSAVAPGTALRDGLERILRGNTGGLIVLGWDKTVESMCTGGFVLDVDFTATRLR
ELCKLDGGIVVDKDITKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVGFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPGPTAKRSRTVDEALSDLNALAHSELLELPTVARALGYTGSPEALDSAVSPRGFRLLAKVPRLPGT
IIDRLVEHFGSLQKLLAASVDDLQAVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=677396 OG568_RS23290 WP_266584576.1 5211401..5212525(+) (disA) [Streptomyces sp. NBC_01450]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAGTCCGGTGGGAGCTCCGGTGCCGATGGCCTGATGCGCGCCTCATT
GAGCGCCGTGGCACCTGGCACGGCCCTGCGCGACGGGCTCGAGAGAATTCTCCGCGGCAACACGGGCGGACTCATCGTGC
TCGGCTGGGACAAGACCGTCGAGTCGATGTGCACGGGCGGCTTCGTCCTGGACGTCGACTTCACGGCGACCCGGTTGCGC
GAGCTGTGCAAGCTCGACGGCGGCATCGTCGTCGACAAGGACATCACCAAGATCCTTCGGGCCGGCGTCCAGCTGGTGCC
CGACCCGACGATCCCGACGGAGGAGACCGGCACCCGGCACCGCACGGCGGACCGGGTGAGCAAGCAGGTCGGCTTCCCCG
TCGTCTCGGTCTCCCAGTCGATGCGTCTGATCGCGCTGTACGTCGACGGTCAGCGCCGCGTCCTGGAGGACTCCGCAGCG
ATCCTCTCCCGTGCCAACCAGGCCCTCGCGACCCTGGAGCGCTACAAGCTCCGCCTCGACGAGGTCGCGGGCACGCTCTC
CGCGCTGGAGATCGAGGACCTGGTCACCGTCCGCGACGTGTCGGCGGTGGCGCAGCGCCTGGAGATGGTGCGGCGCATCG
CCACGGAGATCGCCGAGTACGTGGTGGAGTTGGGCACGGACGGGCGTCTGCTCGCCCTCCAGCTGGACGAGTTGATCGCC
GGCGTGGAGCCCGAGCGGGAGCTGGTGGTCCGGGACTACGTGCCGGGGCCGACCGCGAAGCGTTCCCGCACGGTCGACGA
GGCTCTCTCCGACCTGAACGCCCTGGCCCACTCCGAGCTGCTCGAACTGCCCACGGTGGCGAGAGCCTTGGGCTACACCG
GCTCCCCCGAGGCACTCGACTCCGCGGTCTCCCCGCGCGGCTTCCGCCTCCTCGCCAAGGTTCCGCGTCTGCCCGGCACG
ATCATCGACCGTCTCGTGGAGCACTTCGGCAGTCTGCAGAAGCTCCTCGCCGCGAGCGTCGACGACCTCCAGGCGGTCGA
CGGGGTGGGCGAGGCGCGGGCGCGCAGCGTCCGTGAGGGCCTGTCGCGGCTGGCGGAGTCGTCGATCCTGGAGCGCTACG
TCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

44.321

96.524

0.428