Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG511_RS15800 Genome accession   NZ_CP109478
Coordinates   3511265..3512389 (+) Length   374 a.a.
NCBI ID   WP_116511422.1    Uniprot ID   A0ABV4SRP8
Organism   Streptomyces sp. NBC_01453     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3506265..3517389
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG511_RS15785 (OG511_15825) - 3506795..3507724 (+) 930 WP_326711794.1 hypothetical protein -
  OG511_RS15790 (OG511_15830) - 3507758..3509476 (-) 1719 WP_328542456.1 hypothetical protein -
  OG511_RS15795 (OG511_15835) radA/sms 3509743..3511152 (+) 1410 WP_327578212.1 DNA repair protein RadA Machinery gene
  OG511_RS15800 (OG511_15840) disA 3511265..3512389 (+) 1125 WP_116511422.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG511_RS15805 (OG511_15845) - 3512875..3513669 (-) 795 WP_327578211.1 hypothetical protein -
  OG511_RS15810 (OG511_15850) - 3513855..3514496 (+) 642 WP_327578210.1 phosphatase PAP2 family protein -
  OG511_RS15815 (OG511_15855) - 3514497..3515083 (-) 587 Protein_3137 response regulator transcription factor -
  OG511_RS15820 (OG511_15860) - 3515714..3516610 (+) 897 WP_326711798.1 A/G-specific adenine glycosylase -
  OG511_RS15825 (OG511_15865) - 3516792..3517340 (+) 549 WP_116511432.1 SigE family RNA polymerase sigma factor -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40297.15 Da        Isoelectric Point: 4.9269

>NTDB_id=677216 OG511_RS15800 WP_116511422.1 3511265..3512389(+) (disA) [Streptomyces sp. NBC_01453]
MAANDRAAAPGKSGGSSGADGLMRASLSAVAPGTALRDGLERILRGNTGGLIVLGWDKTVESMCTGGFILDVEFTATRLR
ELCKLDGGIVIDKDITKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVSFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDEALFELDALTHAELLELPTVARALGYTGSPETLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQAVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=677216 OG511_RS15800 WP_116511422.1 3511265..3512389(+) (disA) [Streptomyces sp. NBC_01453]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGCAAGTCCGGCGGGAGCTCCGGTGCCGATGGGCTGATGCGCGCCTCACT
GAGCGCGGTCGCGCCCGGTACGGCGCTGCGTGACGGCCTCGAGCGAATCCTCCGCGGCAACACCGGCGGACTCATCGTTC
TCGGCTGGGACAAGACCGTCGAGTCGATGTGTACCGGCGGTTTCATCCTGGACGTCGAGTTCACCGCGACGCGACTGCGC
GAGCTGTGCAAGCTCGACGGCGGCATCGTCATCGACAAGGACATCACCAAGATCCTTCGGGCGGGCGTCCAGTTGGTGCC
CGACCCCACGATCCCCACGGAGGAGACGGGCACGCGGCACCGCACCGCGGACCGGGTGAGCAAGCAGGTCAGCTTCCCCG
TGGTCTCGGTGTCTCAGTCGATGCGGCTCATCGCCCTTTACGTGGACGGGCAGCGGCGCGTCCTCGAGGACTCGGCCGCG
ATTCTCTCGCGTGCGAATCAGGCGCTTGCCACCCTTGAGCGGTACAAGCTCCGCTTGGACGAGGTGGCCGGGACGCTCTC
CGCGCTCGAGATCGAGGATCTCGTGACCGTGCGGGATGTGACCGCGGTCGCGCAGCGGCTGGAGATGGTGCGGCGCATCG
CCACCGAGATCGCCGAGTACGTGGTGGAGCTCGGGACGGATGGCCGACTGCTCGCCCTTCAGCTCGACGAGTTGATCGCC
GGGGTGGAGCCCGAGCGGGAGCTCGTCGTTCGGGACTATGTGCCCGAACCTACGGCCAAGCGGTCCCGGACCGTCGACGA
GGCGCTGTTCGAGCTCGACGCGCTGACGCATGCCGAGCTTCTCGAACTGCCCACCGTGGCACGCGCGTTGGGGTACACCG
GGTCTCCGGAGACCCTGGACTCGGCCGTTTCGCCTCGCGGGTTCCGGCTGTTGGCGAAGGTGCCTCGGCTGCCCGGGGCC
ATCATCGACCGGCTTGTCGAGCACTTCGGGGGGCTGCAGAAGCTGCTCGCCGCCAGCGTCGATGATCTGCAGGCCGTGGA
CGGCGTCGGGGAGGCCCGTGCCCGGAGCGTGCGGGAAGGGCTCTCGCGGTTGGCCGAGTCGTCGATCCTGGAGCGGTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

44.598

96.524

0.43