Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   MW696_RS17685 Genome accession   NZ_CP095476
Coordinates   3474082..3475035 (+) Length   317 a.a.
NCBI ID   WP_247070349.1    Uniprot ID   -
Organism   Bacillus glycinifermentans strain MGMM1     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3469082..3480035
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MW696_RS17670 (MW696_17675) - 3469157..3470581 (+) 1425 WP_281503717.1 HAMP domain-containing sensor histidine kinase -
  MW696_RS17675 (MW696_17680) - 3470620..3472338 (-) 1719 WP_247070346.1 methyl-accepting chemotaxis protein -
  MW696_RS17680 (MW696_17685) - 3472450..3473811 (-) 1362 WP_247070348.1 aspartate kinase -
  MW696_RS17685 (MW696_17690) ceuB 3474082..3475035 (+) 954 WP_247070349.1 ABC transporter permease Machinery gene
  MW696_RS17690 (MW696_17695) - 3475025..3475969 (+) 945 WP_247070350.1 iron chelate uptake ABC transporter family permease subunit -
  MW696_RS17695 (MW696_17700) - 3475969..3476727 (+) 759 WP_247070351.1 ABC transporter ATP-binding protein -
  MW696_RS17700 (MW696_17705) - 3476747..3477688 (+) 942 WP_247070352.1 siderophore ABC transporter substrate-binding protein -
  MW696_RS17705 (MW696_17710) - 3477763..3479178 (-) 1416 WP_247070353.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35073.36 Da        Isoelectric Point: 9.7913

>NTDB_id=677180 MW696_RS17685 WP_247070349.1 3474082..3475035(+) (ceuB) [Bacillus glycinifermentans strain MGMM1]
MKLRYLLLLLIILCFSSIFIGVKQLSPLDLFRLNEDDIQTLYISRLPRMISIVLAGMSLSICGLIMQQLTRNKFVSPTTA
GTMDWARLGVIISIMLFSSAGMVVKIVFACAFSLFGSFLFLKILDSIRFKDAVFIPLVGLMLGGVVSAISTFIAYQYNLI
QNVNAWFEGNFSLVMKGRYELLYLSIPLVIIAYLFANKFTVAGMGESFSVNLGLNYQRVINIGLIIVSVISSVVILTVGT
LPFLGLIIPNIVSIYRGDHLKNSLPHTAVLGAVFVLFCDILGRLVIYPYEISVGLMVGIIGSGVFLYLLLRRKAYGF

Nucleotide


Download         Length: 954 bp        

>NTDB_id=677180 MW696_RS17685 WP_247070349.1 3474082..3475035(+) (ceuB) [Bacillus glycinifermentans strain MGMM1]
ATGAAATTGCGGTATTTACTGCTTCTGCTCATCATTCTTTGTTTCAGTTCAATTTTTATCGGCGTCAAACAACTGTCACC
CCTTGATCTATTCAGGTTGAACGAGGATGACATTCAGACGCTGTACATAAGCCGGCTTCCGCGAATGATCAGCATCGTGC
TTGCGGGAATGAGCCTGAGCATCTGCGGGCTGATTATGCAGCAGCTGACACGCAATAAATTCGTCTCGCCGACGACGGCC
GGGACGATGGATTGGGCAAGGCTCGGCGTCATCATTTCGATTATGCTGTTTTCTTCAGCGGGCATGGTTGTAAAGATTGT
GTTTGCCTGTGCTTTTTCGCTGTTCGGCAGCTTTTTGTTTCTTAAGATTTTGGACAGCATCAGATTTAAGGACGCGGTGT
TTATTCCGCTCGTCGGTTTGATGCTTGGAGGCGTTGTCAGCGCTATTTCCACGTTCATAGCGTATCAGTACAACCTGATT
CAAAACGTCAATGCGTGGTTTGAGGGGAATTTCTCGCTTGTCATGAAAGGAAGGTATGAGCTGTTATACTTGAGCATTCC
GCTCGTCATCATCGCCTATCTGTTTGCCAATAAATTTACGGTGGCCGGGATGGGCGAGAGCTTCTCCGTCAATCTGGGGC
TGAATTATCAGCGGGTGATCAACATCGGCCTGATCATTGTTTCGGTCATCTCGTCGGTCGTCATTTTGACGGTCGGGACG
CTTCCTTTCCTCGGACTGATCATTCCGAATATCGTTTCGATTTATCGCGGAGACCATTTGAAAAACAGCCTGCCTCACAC
GGCGGTTCTAGGCGCCGTCTTTGTCCTGTTTTGTGACATATTGGGCCGGCTGGTCATTTATCCTTATGAAATCTCGGTCG
GCCTGATGGTCGGCATCATCGGAAGCGGCGTTTTTCTTTACTTGCTTTTAAGGAGAAAAGCCTATGGATTCTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

50.949

99.685

0.508