Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | MW696_RS15770 | Genome accession | NZ_CP095476 |
| Coordinates | 3083463..3085895 (+) | Length | 810 a.a. |
| NCBI ID | WP_006640291.1 | Uniprot ID | - |
| Organism | Bacillus glycinifermentans strain MGMM1 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3078463..3090895
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MW696_RS15730 (MW696_15735) | lysS | 3078905..3080404 (+) | 1500 | WP_247070064.1 | lysine--tRNA ligase | - |
| MW696_RS15755 (MW696_15760) | - | 3081339..3081803 (+) | 465 | WP_048355822.1 | CtsR family transcriptional regulator | - |
| MW696_RS15760 (MW696_15765) | - | 3081818..3082375 (+) | 558 | WP_048355823.1 | UvrB/UvrC motif-containing protein | - |
| MW696_RS15765 (MW696_15770) | - | 3082375..3083466 (+) | 1092 | WP_048355824.1 | protein arginine kinase | - |
| MW696_RS15770 (MW696_15775) | clpC | 3083463..3085895 (+) | 2433 | WP_006640291.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| MW696_RS15775 (MW696_15780) | radA | 3085972..3087351 (+) | 1380 | WP_048355825.1 | DNA repair protein RadA | Machinery gene |
| MW696_RS15780 (MW696_15785) | disA | 3087355..3088431 (+) | 1077 | WP_247070067.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| MW696_RS15785 (MW696_15790) | - | 3088551..3089639 (+) | 1089 | WP_048355826.1 | PIN/TRAM domain-containing protein | - |
| MW696_RS15790 (MW696_15795) | ispD | 3089655..3090350 (+) | 696 | WP_048355827.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
| MW696_RS15795 (MW696_15800) | ispF | 3090343..3090819 (+) | 477 | WP_247070069.1 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | - |
Sequence
Protein
Download Length: 810 a.a. Molecular weight: 90141.72 Da Isoelectric Point: 5.9765
>NTDB_id=677178 MW696_RS15770 WP_006640291.1 3083463..3085895(+) (clpC) [Bacillus glycinifermentans strain MGMM1]
MMFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLSPDKIQKEVESLIGRGQEMSQSIHY
TPRAKKVTELAMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNESGGGASGANSNANT
PTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVM
TLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEY
RKYIEKDAALERRFQPIQVDQPSPEESIQILKGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAGS
KVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEETKKTWKEKQGQENSEVTVDDIAMVV
SSWTGVPVSKIAQTETDKLLNMESILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE
SIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLT
DSKGRTVDFRNTILIMTSNVGASELRRNKYVGFNVQDETQNYKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLK
DIVSLMSDQLTKRLKEQDLSIELTEAAKEKIAEEGVDLEYGARPLRRAIQKHVEDRLSEELLKGNITKGQHIVLDVENGE
FVVKTEAKTN
MMFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLSPDKIQKEVESLIGRGQEMSQSIHY
TPRAKKVTELAMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNESGGGASGANSNANT
PTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVM
TLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEY
RKYIEKDAALERRFQPIQVDQPSPEESIQILKGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAGS
KVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEETKKTWKEKQGQENSEVTVDDIAMVV
SSWTGVPVSKIAQTETDKLLNMESILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE
SIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLT
DSKGRTVDFRNTILIMTSNVGASELRRNKYVGFNVQDETQNYKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLK
DIVSLMSDQLTKRLKEQDLSIELTEAAKEKIAEEGVDLEYGARPLRRAIQKHVEDRLSEELLKGNITKGQHIVLDVENGE
FVVKTEAKTN
Nucleotide
Download Length: 2433 bp
>NTDB_id=677178 MW696_RS15770 WP_006640291.1 3083463..3085895(+) (clpC) [Bacillus glycinifermentans strain MGMM1]
ATGATGTTTGGAAGATTCACAGAAAGAGCACAAAAAGTATTGGCGCTTGCCCAAGAAGAGGCTCTGCGTCTCGGGCACAA
TAATATTGGAACTGAGCATATCCTGCTGGGACTTGTCCGCGAGGGAGAAGGGATTGCTGCAAAGGCGCTGCAGGCGCTGG
GACTCAGCCCCGATAAAATACAAAAAGAGGTCGAAAGCCTGATCGGCCGCGGACAGGAAATGTCCCAGTCCATTCACTAT
ACACCGAGGGCAAAAAAAGTGACGGAACTTGCGATGGATGAAGCGAGGAAGCTCGGGCATTCATATGTCGGAACCGAGCA
CATCCTCCTGGGATTAATTCGTGAAGGCGAAGGCGTCGCTGCCAGAGTGCTGAACAATTTGGGCGTCAGCTTGAATAAAG
CAAGACAACAGGTGCTGCAGCTGTTGGGCAGCAATGAGAGCGGAGGCGGTGCGTCCGGGGCAAATAGCAATGCCAACACA
CCTACCTTGGACAGCCTCGCCCGCGATTTGACCGCGATTGCGAAAGAGGACAGCCTCGATCCGGTCATCGGGCGCAGCAA
AGAAATTCAGCGCGTCATCGAAGTACTGAGCCGCAGAACGAAAAACAATCCTGTGTTAATCGGGGAGCCCGGCGTCGGTA
AGACAGCGATAGCTGAAGGCTTAGCCCAGCAGATTATCAATAATGAAGTACCTGAAATTTTACGCGACAAGCGGGTGATG
ACGCTTGATATGGGAACTGTTGTTGCAGGTACAAAATACCGCGGGGAATTTGAAGACCGCCTTAAAAAAGTAATGGACGA
AATCCGTCAGGCAGGAAACATCATCCTGTTTATCGATGAACTTCATACATTAATTGGTGCAGGCGGCGCTGAAGGCGCAA
TTGACGCCTCCAATATCCTGAAGCCTTCCCTGGCGCGCGGAGAATTGCAATGCATCGGGGCTACAACACTTGACGAATAT
CGTAAATACATTGAAAAAGACGCTGCGCTTGAACGGCGCTTTCAGCCGATTCAGGTAGACCAGCCGTCACCTGAGGAAAG
CATTCAGATTTTGAAAGGGCTGCGTGACCGTTATGAAGCACATCACCGCGTCTCTATCACTGACGAAGCGATCGAAGCCG
CTGTTAAACTGTCAGACCGGTATATTTCCGACCGCTTCCTGCCTGACAAAGCGATCGATTTAATCGATGAGGCCGGTTCA
AAGGTTCGCCTGCGTTCATTTACAACGCCTCCTAACCTGAAAGAGCTTGAACAAAAGCTCGATGAAGTCCGTAAAGAAAA
AGATGCCGCAGTTCAAAGCCAGGAATTTGAAAAAGCAGCGTCATTGCGTGATACGGAGCAGCGTTTGCGGGAACAGGTAG
AAGAAACGAAGAAAACGTGGAAAGAAAAGCAGGGGCAAGAAAACTCCGAAGTGACGGTTGACGATATTGCGATGGTTGTA
TCAAGCTGGACCGGAGTGCCTGTGTCAAAAATCGCTCAGACTGAAACAGATAAGCTGCTGAATATGGAAAGCATTCTTCA
TTCGCGGGTTATCGGTCAGGATGAAGCGGTAGTCGCCGTTGCGAAAGCAGTAAGACGCGCGCGCGCCGGACTGAAAGATC
CGAAACGTCCGATCGGCTCGTTTATTTTCCTCGGACCGACCGGCGTCGGCAAAACAGAGCTTGCCCGCGCGCTTGCGGAA
TCGATTTTCGGTGATGAAGAAGCGATGATCCGCATCGATATGTCAGAGTATATGGAGAAGCATTCGACATCAAGACTCGT
CGGTTCTCCTCCGGGATATGTCGGCTATGATGAGGGCGGACAGCTTACTGAAAAGGTGAGAAGAAAACCTTATTCAGTCG
TCCTGCTCGATGAGATTGAAAAAGCCCACCCTGACGTCTTCAATATTCTGCTGCAAGTGCTTGAAGACGGCCGTTTGACC
GATTCAAAAGGACGCACTGTTGACTTTAGAAATACGATCCTGATTATGACGTCAAACGTCGGCGCAAGCGAGCTGAGAAG
AAATAAATACGTCGGGTTTAACGTACAGGACGAAACGCAGAATTACAAAGATATGAAAGACAAAGTGATGGGCGAATTAA
AACGCGCCTTCAGACCGGAGTTCATCAACCGGATTGATGAAATTATCGTTTTCCACTCACTGGAGAAAAAACATTTGAAA
GACATCGTCTCCCTCATGTCAGACCAATTGACAAAGCGTCTGAAAGAACAGGACCTTTCCATTGAATTGACAGAGGCGGC
AAAAGAAAAAATCGCCGAAGAAGGCGTTGACCTTGAATACGGAGCCCGTCCGCTCAGAAGAGCCATCCAGAAACACGTCG
AAGACCGGCTGTCTGAAGAGCTCTTGAAGGGCAATATTACAAAAGGACAGCATATCGTGCTCGATGTGGAAAACGGAGAG
TTTGTCGTAAAAACAGAAGCTAAAACGAACTAA
ATGATGTTTGGAAGATTCACAGAAAGAGCACAAAAAGTATTGGCGCTTGCCCAAGAAGAGGCTCTGCGTCTCGGGCACAA
TAATATTGGAACTGAGCATATCCTGCTGGGACTTGTCCGCGAGGGAGAAGGGATTGCTGCAAAGGCGCTGCAGGCGCTGG
GACTCAGCCCCGATAAAATACAAAAAGAGGTCGAAAGCCTGATCGGCCGCGGACAGGAAATGTCCCAGTCCATTCACTAT
ACACCGAGGGCAAAAAAAGTGACGGAACTTGCGATGGATGAAGCGAGGAAGCTCGGGCATTCATATGTCGGAACCGAGCA
CATCCTCCTGGGATTAATTCGTGAAGGCGAAGGCGTCGCTGCCAGAGTGCTGAACAATTTGGGCGTCAGCTTGAATAAAG
CAAGACAACAGGTGCTGCAGCTGTTGGGCAGCAATGAGAGCGGAGGCGGTGCGTCCGGGGCAAATAGCAATGCCAACACA
CCTACCTTGGACAGCCTCGCCCGCGATTTGACCGCGATTGCGAAAGAGGACAGCCTCGATCCGGTCATCGGGCGCAGCAA
AGAAATTCAGCGCGTCATCGAAGTACTGAGCCGCAGAACGAAAAACAATCCTGTGTTAATCGGGGAGCCCGGCGTCGGTA
AGACAGCGATAGCTGAAGGCTTAGCCCAGCAGATTATCAATAATGAAGTACCTGAAATTTTACGCGACAAGCGGGTGATG
ACGCTTGATATGGGAACTGTTGTTGCAGGTACAAAATACCGCGGGGAATTTGAAGACCGCCTTAAAAAAGTAATGGACGA
AATCCGTCAGGCAGGAAACATCATCCTGTTTATCGATGAACTTCATACATTAATTGGTGCAGGCGGCGCTGAAGGCGCAA
TTGACGCCTCCAATATCCTGAAGCCTTCCCTGGCGCGCGGAGAATTGCAATGCATCGGGGCTACAACACTTGACGAATAT
CGTAAATACATTGAAAAAGACGCTGCGCTTGAACGGCGCTTTCAGCCGATTCAGGTAGACCAGCCGTCACCTGAGGAAAG
CATTCAGATTTTGAAAGGGCTGCGTGACCGTTATGAAGCACATCACCGCGTCTCTATCACTGACGAAGCGATCGAAGCCG
CTGTTAAACTGTCAGACCGGTATATTTCCGACCGCTTCCTGCCTGACAAAGCGATCGATTTAATCGATGAGGCCGGTTCA
AAGGTTCGCCTGCGTTCATTTACAACGCCTCCTAACCTGAAAGAGCTTGAACAAAAGCTCGATGAAGTCCGTAAAGAAAA
AGATGCCGCAGTTCAAAGCCAGGAATTTGAAAAAGCAGCGTCATTGCGTGATACGGAGCAGCGTTTGCGGGAACAGGTAG
AAGAAACGAAGAAAACGTGGAAAGAAAAGCAGGGGCAAGAAAACTCCGAAGTGACGGTTGACGATATTGCGATGGTTGTA
TCAAGCTGGACCGGAGTGCCTGTGTCAAAAATCGCTCAGACTGAAACAGATAAGCTGCTGAATATGGAAAGCATTCTTCA
TTCGCGGGTTATCGGTCAGGATGAAGCGGTAGTCGCCGTTGCGAAAGCAGTAAGACGCGCGCGCGCCGGACTGAAAGATC
CGAAACGTCCGATCGGCTCGTTTATTTTCCTCGGACCGACCGGCGTCGGCAAAACAGAGCTTGCCCGCGCGCTTGCGGAA
TCGATTTTCGGTGATGAAGAAGCGATGATCCGCATCGATATGTCAGAGTATATGGAGAAGCATTCGACATCAAGACTCGT
CGGTTCTCCTCCGGGATATGTCGGCTATGATGAGGGCGGACAGCTTACTGAAAAGGTGAGAAGAAAACCTTATTCAGTCG
TCCTGCTCGATGAGATTGAAAAAGCCCACCCTGACGTCTTCAATATTCTGCTGCAAGTGCTTGAAGACGGCCGTTTGACC
GATTCAAAAGGACGCACTGTTGACTTTAGAAATACGATCCTGATTATGACGTCAAACGTCGGCGCAAGCGAGCTGAGAAG
AAATAAATACGTCGGGTTTAACGTACAGGACGAAACGCAGAATTACAAAGATATGAAAGACAAAGTGATGGGCGAATTAA
AACGCGCCTTCAGACCGGAGTTCATCAACCGGATTGATGAAATTATCGTTTTCCACTCACTGGAGAAAAAACATTTGAAA
GACATCGTCTCCCTCATGTCAGACCAATTGACAAAGCGTCTGAAAGAACAGGACCTTTCCATTGAATTGACAGAGGCGGC
AAAAGAAAAAATCGCCGAAGAAGGCGTTGACCTTGAATACGGAGCCCGTCCGCTCAGAAGAGCCATCCAGAAACACGTCG
AAGACCGGCTGTCTGAAGAGCTCTTGAAGGGCAATATTACAAAAGGACAGCATATCGTGCTCGATGTGGAAAACGGAGAG
TTTGTCGTAAAAACAGAAGCTAAAACGAACTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
96.296 |
100 |
0.963 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
50.124 |
99.506 |
0.499 |
| clpC | Streptococcus thermophilus LMG 18311 |
47.087 |
100 |
0.479 |
| clpC | Streptococcus thermophilus LMD-9 |
46.966 |
100 |
0.478 |
| clpC | Streptococcus pneumoniae Rx1 |
45.488 |
99.877 |
0.454 |
| clpC | Streptococcus pneumoniae D39 |
45.488 |
99.877 |
0.454 |
| clpC | Streptococcus pneumoniae TIGR4 |
45.365 |
99.877 |
0.453 |
| clpC | Streptococcus mutans UA159 |
43.728 |
100 |
0.452 |
| clpE | Streptococcus mutans UA159 |
53.467 |
80.123 |
0.428 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
52.276 |
78.642 |
0.411 |
| clpE | Streptococcus pneumoniae TIGR4 |
53.291 |
76.914 |
0.41 |
| clpE | Streptococcus pneumoniae Rx1 |
53.291 |
76.914 |
0.41 |
| clpE | Streptococcus pneumoniae D39 |
53.291 |
76.914 |
0.41 |
| clpE | Streptococcus pneumoniae R6 |
53.291 |
76.914 |
0.41 |