Detailed information NTG0677175

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: MW696_RS15285
• Genome accession: NZ_CP095476
• Coordinates: 2997383..2998495 (+)
• Length: 370 a.a.
• NCBI ID: WP_048353834.1
• Uniprot ID: A0A0T6BKF2
• Organism: Bacillus glycinifermentans strain MGMM1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2992383..3003495

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MW696_RS15260 (MW696_15265)	rnpA	2993132..2993491 (-)	360	WP_048406245.1	ribonuclease P protein component	-
MW696_RS15265 (MW696_15270)	rpmH	2993577..2993711 (-)	135	WP_082094032.1	50S ribosomal protein L34	-
MW696_RS15270 (MW696_15275)	dnaA	2994344..2995687 (+)	1344	WP_048406804.1	chromosomal replication initiator protein DnaA	-
MW696_RS15275 (MW696_15280)	dnaN	2995856..2996992 (+)	1137	WP_048353836.1	DNA polymerase III subunit beta	-
MW696_RS15280 (MW696_15285)	yaaA	2997152..2997367 (+)	216	WP_048353835.1	S4 domain-containing protein YaaA	-
MW696_RS15285 (MW696_15290)	recF	2997383..2998495 (+)	1113	WP_048353834.1	DNA replication/repair protein RecF	Machinery gene
MW696_RS15290 (MW696_15295)	-	2998513..2998755 (+)	243	WP_048353833.1	extracellular matrix/biofilm biosynthesis regulator RemA family protein	-
MW696_RS15295 (MW696_15300)	gyrB	2998803..3000731 (+)	1929	WP_048353832.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	-
MW696_RS15300 (MW696_15305)	gyrA	3000907..3003366 (+)	2460	WP_247070032.1	DNA gyrase subunit A	-

Sequence

Protein

• Length: 370 a.a.
• Molecular weight: 42325.21 Da
• Isoelectric Point: 6.7865

>NTDB_id=677175 MW696_RS15285 WP_048353834.1 2997383..2998495(+) (recF) [Bacillus glycinifermentans strain MGMM1]
MYIQNLTLSSYRNYEHVELEFENKVNVIIGENAQGKTNLMEAIYVLAMAKSHRTSNDKELIRWDQDYAKIEGRVIKKNGP
VPIQLVISKKGKKGKVNHIEQQKLSQYVGAVNTIMFAPEDLNLVKGSPQVRRRFLDMEIGQVSPVYLHDLSLYQKILSQR
NHFLKQLQTRKQTDQTMLDVLTEQLTEFAAKVVMKRLQFVDQLEKWAQPIHSGISRGLEELTLKYHTSLHVSDSPDLSKM
INSYQESFSKLRDKEIERGVSLSGPHRDDVLFYVNGRDVQTYGSQGQQRTTALSLKLAEIDLIQEEIGEYPILLLDDVLS
ELDDYRQSHLLHTIQGRVQTFVTTTSVDGIDHQTLNEAGIFRVANGALLD

Nucleotide

• Length: 1113 bp

>NTDB_id=677175 MW696_RS15285 WP_048353834.1 2997383..2998495(+) (recF) [Bacillus glycinifermentans strain MGMM1]
TTGTATATCCAAAATCTTACATTATCATCTTACCGCAACTATGAACACGTTGAGCTCGAATTTGAAAACAAAGTGAACGT
GATTATCGGAGAGAATGCACAAGGCAAGACAAATTTGATGGAAGCGATCTACGTGCTTGCAATGGCAAAATCTCATCGGA
CCTCTAATGACAAAGAACTCATACGATGGGATCAAGACTATGCTAAAATAGAAGGTAGGGTCATTAAAAAAAACGGTCCT
GTTCCAATCCAGCTCGTCATTTCCAAAAAAGGAAAAAAAGGAAAGGTCAATCATATTGAACAGCAGAAACTGAGCCAATA
TGTAGGCGCCGTTAACACGATCATGTTTGCTCCTGAAGATTTGAATCTTGTAAAAGGGAGTCCGCAGGTCAGGAGAAGAT
TTCTTGACATGGAAATCGGCCAAGTATCACCCGTCTATCTTCATGACCTTTCTCTTTACCAAAAAATCCTTTCACAGCGC
AACCATTTCTTAAAGCAGCTACAAACGAGAAAACAGACAGATCAGACCATGCTTGACGTACTGACGGAACAGCTTACGGA
ATTCGCGGCAAAGGTTGTGATGAAACGGCTTCAATTTGTTGATCAGCTCGAAAAATGGGCTCAGCCCATCCACTCCGGAA
TTTCGCGTGGCCTGGAAGAACTGACGTTAAAGTATCATACGTCTCTTCACGTATCAGATTCGCCTGATTTGTCGAAAATG
ATCAATAGTTATCAAGAATCATTTTCTAAATTAAGAGATAAAGAAATTGAACGGGGAGTTTCTTTGTCCGGCCCTCATAG
AGACGACGTTTTGTTCTACGTCAACGGCCGGGATGTCCAAACCTACGGTTCACAAGGGCAGCAGCGGACGACTGCATTAT
CTCTTAAATTGGCGGAAATTGATTTGATTCAGGAAGAGATTGGGGAATACCCGATTTTGCTTTTGGATGATGTACTGTCA
GAGCTTGACGACTATCGGCAGTCTCACTTGCTCCACACCATTCAAGGGCGTGTTCAAACTTTCGTGACAACGACAAGCGT
CGACGGAATTGACCATCAAACCTTAAACGAAGCAGGCATCTTTCGTGTTGCAAATGGCGCGCTATTGGACTGA

Domains

Predicted by InterproScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (2-346)

3D structure

• AlphaFold DB: A0A0T6BKF2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Bacillus subtilis subsp. subtilis str. 168	89.702	99.73	0.895