Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   MW696_RS00710 Genome accession   NZ_CP095476
Coordinates   142847..143308 (-) Length   153 a.a.
NCBI ID   WP_046132282.1    Uniprot ID   -
Organism   Bacillus glycinifermentans strain MGMM1     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 137847..148308
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MW696_RS00685 (MW696_00685) - 138256..139425 (-) 1170 WP_048406581.1 aminotransferase A -
  MW696_RS00690 (MW696_00690) - 139583..139738 (-) 156 WP_197089476.1 hypothetical protein -
  MW696_RS00695 (MW696_00695) - 139901..140422 (+) 522 WP_247071386.1 RDD family protein -
  MW696_RS00700 (MW696_00700) - 140501..141817 (+) 1317 WP_247071388.1 MFS transporter -
  MW696_RS00705 (MW696_00705) - 141892..142812 (+) 921 WP_247071390.1 chemotaxis protein -
  MW696_RS00710 (MW696_00710) kre 142847..143308 (-) 462 WP_046132282.1 YkyB family protein Regulator
  MW696_RS00715 (MW696_00715) - 143447..144748 (-) 1302 WP_048406108.1 MFS transporter -
  MW696_RS00720 (MW696_00720) - 144812..145252 (-) 441 WP_247071392.1 L,D-transpeptidase -
  MW696_RS00725 (MW696_00725) - 145424..146281 (-) 858 WP_048406110.1 metallophosphoesterase -
  MW696_RS00730 (MW696_00730) fadH 146428..147192 (+) 765 WP_048406111.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17601.46 Da        Isoelectric Point: 10.6215

>NTDB_id=677129 MW696_RS00710 WP_046132282.1 142847..143308(-) (kre) [Bacillus glycinifermentans strain MGMM1]
MDDHNHTKVLKPTVENLSKAIYTVNRHAKTATDPKYLYLLKKKALQKLINEGKGKKVGLHFSKNPKFSQQQSDVLISLGD
YFFHMPPTKEDFDNLPHLGTLNHSYRNPKAHMSLNIAKQLLQKYTGLKEKPLVTNRKRPSAKPVFKKLGESYF

Nucleotide


Download         Length: 462 bp        

>NTDB_id=677129 MW696_RS00710 WP_046132282.1 142847..143308(-) (kre) [Bacillus glycinifermentans strain MGMM1]
ATGGACGACCATAATCATACTAAAGTATTAAAACCAACAGTTGAAAACCTTTCAAAAGCGATTTACACGGTCAATCGCCA
CGCAAAAACCGCGACCGATCCAAAATACCTGTATCTCCTGAAAAAGAAAGCTCTGCAAAAGCTCATCAATGAAGGAAAAG
GAAAAAAGGTGGGACTTCACTTTTCAAAAAACCCAAAGTTCAGCCAGCAGCAGTCAGATGTGCTTATTTCTCTCGGAGAC
TACTTTTTTCACATGCCTCCAACTAAAGAAGACTTCGATAACCTTCCGCACTTAGGTACACTAAATCATTCTTATCGGAA
CCCTAAAGCTCATATGTCATTGAACATCGCAAAGCAGCTTCTGCAGAAATACACGGGATTGAAGGAAAAGCCGCTTGTCA
CAAACCGGAAGCGCCCTTCGGCAAAGCCCGTATTCAAGAAGCTTGGCGAAAGCTATTTTTGA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

80.519

100

0.81