Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG488_RS16790 Genome accession   NZ_CP109473
Coordinates   3788250..3789374 (+) Length   374 a.a.
NCBI ID   WP_329230115.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01460     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3783250..3794374
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG488_RS16775 (OG488_16765) - 3783803..3784645 (+) 843 WP_329230110.1 hypothetical protein -
  OG488_RS16780 (OG488_16770) - 3784789..3786621 (-) 1833 WP_329230111.1 hypothetical protein -
  OG488_RS16785 (OG488_16775) radA/sms 3786757..3788169 (+) 1413 WP_329230113.1 DNA repair protein RadA Machinery gene
  OG488_RS16790 (OG488_16780) disA 3788250..3789374 (+) 1125 WP_329230115.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG488_RS16795 (OG488_16785) - 3789510..3790346 (-) 837 WP_329238731.1 hypothetical protein -
  OG488_RS16800 (OG488_16790) - 3790608..3791510 (+) 903 WP_329230117.1 A/G-specific adenine glycosylase -
  OG488_RS16805 (OG488_16795) - 3791693..3792277 (+) 585 WP_329230119.1 SigE family RNA polymerase sigma factor -
  OG488_RS16810 (OG488_16800) - 3792331..3792960 (+) 630 WP_329238732.1 hypothetical protein -
  OG488_RS16815 (OG488_16805) cseB 3792972..3793682 (+) 711 WP_329230121.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40362.29 Da        Isoelectric Point: 5.1161

>NTDB_id=677058 OG488_RS16790 WP_329230115.1 3788250..3789374(+) (disA) [Streptomyces sp. NBC_01460]
MAANDRAASPGKSGQGTGNEALMRASLSAVAPGTALRDGLERILRGNTGGLIVLGMDRTVESMCTGGFVLDVEFTATRLR
ELCKLDGAMILDKDMTKILRAGVQLVPDASIPTEETGTRHRTADRVSKACGFPVVSVSQSMRLIALYVHGERRVLEESSA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVSQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVAEALAELDTLTHTELLELPVVARALGYSGSPETLDSAVSPRGFRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQAVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=677058 OG488_RS16790 WP_329230115.1 3788250..3789374(+) (disA) [Streptomyces sp. NBC_01460]
GTGGCAGCCAACGACCGGGCAGCATCGCCCGGAAAGTCCGGCCAAGGCACCGGTAACGAGGCGCTGATGCGCGCCTCGTT
GAGCGCGGTCGCGCCCGGAACGGCCCTCCGCGACGGACTGGAGCGCATCCTCCGCGGCAACACCGGCGGCCTGATCGTCC
TCGGCATGGACAGGACCGTCGAATCCATGTGTACCGGCGGTTTCGTCCTCGACGTGGAGTTCACCGCGACGCGCCTGCGC
GAACTGTGCAAGCTGGACGGCGCGATGATCCTCGACAAGGACATGACCAAGATCCTCCGGGCCGGCGTGCAGCTGGTCCC
GGACGCCTCCATCCCCACCGAGGAGACGGGCACCCGTCACCGCACGGCGGACCGGGTGTCCAAGGCCTGCGGCTTCCCGG
TGGTCTCGGTCTCCCAGTCGATGCGGCTGATCGCGCTGTACGTGCACGGGGAGCGGCGGGTCCTGGAGGAGTCCTCCGCG
ATCCTGTCCCGCGCCAATCAGGCGCTCGCCACCCTGGAGCGGTACAAGCTCAGGCTGGACGAGGTCGCCGGCACCCTCTC
CGCGCTGGAGATCGAGGACCTGGTGACGGTCCGGGACGTGACGGCGGTCTCCCAGCGGCTGGAGATGGTGCGCAGGATCG
CGACCGAGATCGCCGAGTACGTGGTGGAGCTGGGTACCGACGGCCGGCTCCTGTCGCTCCAGCTGGACGAGCTGATCGCC
GGTGTCGAGCCGGAGCGGGAGCTGGTCGTACGCGACTACGTGCCCGAGCCGACCGCGAAGCGTTCCCGCACGGTGGCCGA
GGCGCTGGCCGAGCTGGACACGCTCACCCACACCGAGCTGCTCGAACTTCCCGTGGTGGCACGGGCGCTGGGATACAGCG
GCTCACCCGAGACGCTGGACTCCGCGGTCTCCCCCCGGGGCTTCCGGCTGCTGGCGAAGGTGCCCCGGCTGCCCGGGGCG
ATCATCGAGCGGCTGGTGGAGCACTTCGGCGGCCTGCAGAAGCTGCTCGCCGCGAGCGTGGACGACCTCCAGGCCGTGGA
CGGGGTCGGCGAGGCGCGGGCCCGGAGCGTGCGCGAGGGGCTCTCGCGGCTGGCGGAGTCGTCGATCCTCGAGCGGTACG
TCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.152

96.524

0.436