Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   MUG87_RS17210 Genome accession   NZ_CP095462
Coordinates   3410771..3412594 (+) Length   607 a.a.
NCBI ID   WP_247083801.1    Uniprot ID   -
Organism   Ectobacillus sp. JY-23     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 3405771..3417594
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUG87_RS17180 (MUG87_17180) cls 3406177..3407703 (+) 1527 WP_247083795.1 cardiolipin synthase -
  MUG87_RS17185 (MUG87_17185) - 3407800..3408138 (+) 339 WP_247083796.1 DUF4183 domain-containing protein -
  MUG87_RS17190 (MUG87_17190) - 3408149..3408562 (+) 414 WP_247083797.1 DUF4183 domain-containing protein -
  MUG87_RS17195 (MUG87_17195) - 3408563..3408961 (-) 399 WP_247083798.1 DUF4183 domain-containing protein -
  MUG87_RS17200 (MUG87_17200) - 3408973..3409377 (-) 405 WP_247083799.1 hypothetical protein -
  MUG87_RS17205 (MUG87_17205) - 3409522..3410706 (+) 1185 WP_247083800.1 competence protein CoiA -
  MUG87_RS17210 (MUG87_17210) pepF 3410771..3412594 (+) 1824 WP_247083801.1 oligoendopeptidase F Regulator
  MUG87_RS17215 (MUG87_17215) - 3413686..3414531 (-) 846 WP_247083803.1 DsbA family protein -
  MUG87_RS17220 (MUG87_17220) - 3414524..3414928 (-) 405 WP_247083804.1 globin -
  MUG87_RS17225 (MUG87_17225) - 3415018..3415590 (-) 573 WP_247083805.1 CYTH domain-containing protein -
  MUG87_RS17230 (MUG87_17230) - 3415722..3416090 (+) 369 WP_247083806.1 hypothetical protein -
  MUG87_RS17235 (MUG87_17235) - 3416106..3416729 (+) 624 WP_247083807.1 GTP pyrophosphokinase family protein -
  MUG87_RS17240 (MUG87_17240) - 3416751..3417548 (+) 798 WP_247083808.1 NAD kinase -

Sequence

Protein


Download         Length: 607 a.a.        Molecular weight: 70296.91 Da        Isoelectric Point: 4.7963

>NTDB_id=676983 MUG87_RS17210 WP_247083801.1 3410771..3412594(+) (pepF) [Ectobacillus sp. JY-23]
MSEQKTVNKLPRREELDKAYMWKLEDIFASDQEWEKEFEQVKGLLPKLVDFKGKLGESSQQLLEMLQYQDEVSLRLGKLY
TYAHMRYDQDTTNSFYQALNDRATNLYTELSSSTAYIVPEILAVPEEKLQAFLTENKDLALYAHSLEEINRQRPHVLSEN
EEAILAQASDALRTASNTFGMLNNADLKFPEITDENGEEVEVTHGRYIRFLESEDQRVRHDAFKAVYDTYGQYRNTLAST
LSGAVKRNNFYARVRKYDSARQAALANNSIPESVYDQLVGTVNDNLHLLHRYIDIRKRALGVDELHMYDLYTPLVKEVKM
EVSYEEAQELLLKSLAVLGDEYVEILKQAYADGWVDVYENKGKRSGAYSSGAYGTNPYILMNWHDNVNNLFTLAHEFGHS
VHSYYTRKHQPYVYGDYSIFVAEVASTCNEALLNDYLLKTTDDKKKRLYLLNHYLEGFRGTVFRQTMFAEFEHLIHMKAQ
EGEALTPDLLTELYYDLNKKYFGNNLVIDEEIGLEWSRIPHFYYNYYVYQYATGFSAATALSKQILEEGEPAVKRYIDNF
LKAGSSDYPIEVLKKAGVDMTSSKPIEEALQVFAEKLDELERLLFEE

Nucleotide


Download         Length: 1824 bp        

>NTDB_id=676983 MUG87_RS17210 WP_247083801.1 3410771..3412594(+) (pepF) [Ectobacillus sp. JY-23]
ATGTCAGAGCAAAAAACAGTAAATAAATTGCCGCGTCGTGAGGAACTGGACAAGGCATACATGTGGAAGCTTGAAGATAT
TTTCGCATCTGATCAAGAATGGGAAAAAGAGTTTGAACAAGTAAAAGGATTGCTGCCGAAGCTTGTTGATTTTAAAGGAA
AGCTTGGCGAATCCTCTCAGCAATTGCTTGAAATGCTTCAGTATCAAGATGAGGTATCGCTTCGTCTCGGTAAGTTATAT
ACATACGCACATATGCGATACGATCAAGACACAACGAATTCTTTTTACCAAGCTTTAAATGATCGGGCAACAAATTTGTA
TACGGAGCTTTCTAGCAGCACAGCATACATTGTGCCGGAGATTTTAGCTGTACCGGAGGAAAAGCTACAGGCATTTTTAA
CAGAGAATAAAGACTTAGCTCTGTATGCACATTCTTTAGAAGAAATTAACCGTCAGCGTCCACATGTATTGTCTGAGAAT
GAGGAAGCAATTTTAGCGCAAGCATCTGACGCGCTACGCACTGCGAGCAATACGTTTGGAATGTTAAACAATGCGGACTT
GAAGTTTCCGGAAATTACGGATGAAAACGGTGAAGAGGTAGAGGTGACGCATGGGCGCTATATTCGCTTTTTAGAAAGCG
AAGACCAGCGTGTACGTCATGATGCGTTTAAAGCCGTATACGATACGTATGGTCAGTATAGAAATACATTGGCCAGCACA
CTGAGTGGCGCTGTGAAGCGTAATAACTTTTATGCGCGTGTCCGCAAGTATGATTCTGCTAGACAAGCAGCTCTTGCGAA
CAATAGTATTCCGGAAAGTGTGTACGACCAATTAGTCGGCACAGTAAATGATAATTTGCACCTGTTGCATCGTTATATTG
ACATTCGTAAACGTGCGCTTGGTGTAGATGAGCTGCATATGTATGATTTGTACACGCCGCTTGTTAAGGAAGTCAAGATG
GAAGTGTCATATGAAGAAGCACAAGAATTATTATTGAAGTCTCTTGCTGTGTTAGGAGACGAGTATGTGGAAATTTTGAA
GCAAGCATACGCAGATGGCTGGGTAGATGTGTATGAAAACAAGGGCAAGCGCAGCGGTGCCTATTCCTCAGGTGCATATG
GTACAAATCCGTACATTTTAATGAACTGGCATGACAATGTAAACAACCTGTTCACATTAGCGCATGAGTTCGGTCATTCT
GTACACAGCTATTACACAAGAAAGCATCAACCGTATGTGTATGGAGACTATTCTATTTTCGTCGCAGAAGTTGCATCTAC
ATGCAATGAAGCGTTGTTAAACGATTACTTGCTTAAGACGACAGACGATAAGAAAAAACGTTTGTACTTGTTAAATCATT
ATTTAGAAGGATTCCGTGGTACAGTGTTCCGTCAAACAATGTTTGCTGAGTTTGAACACCTCATTCATATGAAGGCGCAA
GAAGGCGAGGCGTTAACACCTGACTTATTAACGGAACTATACTACGATCTTAATAAGAAGTACTTTGGAAACAACCTTGT
CATTGATGAGGAAATCGGTCTGGAGTGGTCGCGTATTCCGCATTTCTACTACAATTACTATGTGTATCAATACGCAACGG
GCTTCAGTGCGGCAACTGCGCTATCTAAGCAGATTTTAGAAGAGGGCGAGCCTGCGGTGAAACGCTACATTGATAACTTC
TTAAAAGCGGGTAGCTCTGATTACCCAATCGAAGTGTTGAAAAAAGCCGGTGTAGATATGACATCTTCTAAGCCAATAGA
AGAAGCACTTCAAGTGTTCGCTGAAAAATTAGATGAGCTAGAGCGATTGTTGTTTGAAGAATAA

Domains

Predicted by InterproScan.

Peptidase family M3 (Peptidase_M3)

(211-591)

Oligopeptidase F (Peptidase_M3_N)

(120-189)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

50

97.529

0.488