Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   MUG87_RS17100 Genome accession   NZ_CP095462
Coordinates   3390552..3390734 (+) Length   60 a.a.
NCBI ID   WP_247083774.1    Uniprot ID   -
Organism   Ectobacillus sp. JY-23     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 3385552..3395734
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUG87_RS17080 (MUG87_17080) clpB 3385650..3388235 (+) 2586 WP_247083766.1 ATP-dependent chaperone ClpB -
  MUG87_RS17085 (MUG87_17085) - 3388604..3388786 (-) 183 WP_247083768.1 YjzD family protein -
  MUG87_RS17090 (MUG87_17090) - 3388932..3389657 (+) 726 WP_247083770.1 alpha/beta hydrolase -
  MUG87_RS17095 (MUG87_17095) - 3389687..3390484 (+) 798 WP_247083772.1 NAD(P)-dependent oxidoreductase -
  MUG87_RS17100 (MUG87_17100) comZ 3390552..3390734 (+) 183 WP_247083774.1 ComZ family protein Regulator
  MUG87_RS17105 (MUG87_17105) - 3391073..3392005 (+) 933 WP_247083776.1 beta-ketoacyl-ACP synthase III -
  MUG87_RS17110 (MUG87_17110) fabF 3392024..3393265 (+) 1242 WP_247083778.1 beta-ketoacyl-ACP synthase II -
  MUG87_RS17115 (MUG87_17115) - 3393449..3394237 (+) 789 WP_247083780.1 DUF2268 domain-containing protein -
  MUG87_RS17120 (MUG87_17120) - 3394402..3395148 (+) 747 WP_247083782.1 YjbA family protein -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 6881.03 Da        Isoelectric Point: 4.1528

>NTDB_id=676979 MUG87_RS17100 WP_247083774.1 3390552..3390734(+) (comZ) [Ectobacillus sp. JY-23]
MDQQRSMQLMQIAFQYLPEAKALLEKSGVELDMSMAQPVMDLLMKVMNEAYELGKQDAQN

Nucleotide


Download         Length: 183 bp        

>NTDB_id=676979 MUG87_RS17100 WP_247083774.1 3390552..3390734(+) (comZ) [Ectobacillus sp. JY-23]
ATGGATCAACAAAGAAGCATGCAGCTTATGCAAATCGCCTTTCAATATCTGCCGGAAGCAAAAGCTTTATTGGAAAAAAG
CGGAGTAGAGCTTGATATGTCTATGGCACAGCCTGTTATGGATCTGCTTATGAAAGTAATGAATGAAGCGTACGAATTGG
GAAAACAGGACGCACAAAATTAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(5-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

56.667

100

0.567