Detailed information NTG0676963

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: MUG87_RS10945
• Genome accession: NZ_CP095462
• Coordinates: 2099107..2100426 (-)
• Length: 439 a.a.
• NCBI ID: WP_247087656.1
• Uniprot ID: -
• Organism: Ectobacillus sp. JY-23
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2094107..2105426

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MUG87_RS10925 (MUG87_10925)	raiA	2096054..2096587 (-)	534	WP_247082007.1	ribosome-associated translation inhibitor RaiA	-
MUG87_RS10930 (MUG87_10930)	-	2096848..2098053 (+)	1206	WP_247082009.1	phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase family protein	-
MUG87_RS10935 (MUG87_10935)	cspD	2098120..2098317 (-)	198	WP_124564518.1	cold-shock protein CspD	-
MUG87_RS10940 (MUG87_10940)	-	2098424..2099110 (-)	687	WP_247082011.1	ComF family protein	-
MUG87_RS10945 (MUG87_10945)	comFA	2099107..2100426 (-)	1320	WP_247087656.1	DEAD/DEAH box helicase	Machinery gene
MUG87_RS10950 (MUG87_10950)	-	2100641..2101789 (-)	1149	WP_247082020.1	NlpC/P60 family protein	-
MUG87_RS10955 (MUG87_10955)	-	2102127..2102438 (-)	312	WP_247082022.1	helix-turn-helix domain-containing protein	-
MUG87_RS10960 (MUG87_10960)	-	2102586..2103428 (-)	843	WP_247082024.1	DegV family protein	-
MUG87_RS10965 (MUG87_10965)	-	2103835..2104470 (+)	636	WP_247082026.1	YigZ family protein	-

Sequence

Protein

• Length: 439 a.a.
• Molecular weight: 49689.93 Da
• Isoelectric Point: 10.1871

>NTDB_id=676963 MUG87_RS10945 WP_247087656.1 2099107..2100426(-) (comFA) [Ectobacillus sp. JY-23]
MLQGRRLLLHEIDIPLKDERVQYETALVPKGKSYLCKRCGNDTPYLFAQTPCVRCGVCVYCRKCIMMGRVQSCSTLVSMP
PEPLPIQHKPLHWNGTLSTGQQQASDAIVRAVLEKKEHLIWAVCGAGKTEMLFAGIEAALQRRERVCIAAPRTDVVLELH
PRLQQVFPHIDVIALYGNSPDRYRNAPLVIATTHQLLRYYRAFDILIIDEVDAFPYTVDKTLRYAAEQARKQQAALIHLT
ATPSKLWKREIRSGKRSATIISARYHRQPLPLPMFVWSGNWKSHIEKGRLPTVVQNWVRTHVKNKRPVFLFVSKVSYVQP
LVACMKQFHLSTEGVHAEDPNRKEKVASFRKGEIAVLVTTTILERGVTIANLQVAVLGAEEPIFTESALVQIAGRVGRNA
SFPNGDVVLFHFGKTKAMLAARRHIQSMNRDARQNGYFE

Nucleotide

• Length: 1320 bp

>NTDB_id=676963 MUG87_RS10945 WP_247087656.1 2099107..2100426(-) (comFA) [Ectobacillus sp. JY-23]
ATGTTGCAGGGCAGACGGTTGTTATTACATGAAATTGATATTCCGTTAAAGGATGAACGTGTTCAGTACGAAACAGCGCT
CGTTCCTAAAGGTAAGAGCTACCTGTGCAAGCGCTGCGGCAACGATACGCCGTATTTATTTGCACAAACGCCTTGTGTAC
GTTGCGGTGTTTGTGTTTATTGTCGTAAATGTATCATGATGGGGCGCGTACAATCATGCTCCACACTTGTCTCTATGCCT
CCTGAGCCTTTGCCTATTCAGCATAAACCACTGCATTGGAACGGTACTTTGTCTACAGGACAACAACAAGCATCAGATGC
AATTGTGCGCGCTGTATTAGAAAAAAAGGAGCACCTTATATGGGCGGTATGCGGTGCTGGTAAAACAGAGATGCTGTTTG
CTGGTATTGAAGCCGCATTACAGCGCAGAGAGCGCGTATGTATTGCAGCGCCGCGCACCGACGTTGTTCTTGAATTGCAC
CCCCGCTTACAACAAGTATTTCCTCACATTGATGTTATCGCTTTATATGGCAATAGCCCCGATCGCTATCGTAATGCGCC
TCTTGTTATCGCTACAACACATCAACTTCTTCGCTATTACCGCGCATTTGATATCCTTATTATTGATGAAGTGGATGCTT
TTCCTTACACAGTAGATAAAACCTTGCGCTATGCGGCCGAGCAAGCGCGTAAGCAGCAAGCTGCGCTTATCCATCTTACT
GCGACACCGAGCAAGCTGTGGAAGCGTGAAATAAGAAGCGGTAAGCGCTCAGCGACAATCATTAGTGCGCGTTACCATCG
TCAGCCACTGCCCTTGCCAATGTTTGTGTGGAGTGGTAATTGGAAGTCACATATAGAGAAGGGGAGGTTGCCTACTGTTG
TGCAAAACTGGGTAAGAACTCATGTGAAAAACAAACGTCCTGTTTTTTTATTTGTATCTAAAGTTTCTTATGTACAACCG
CTCGTTGCATGTATGAAGCAATTTCATCTTTCTACAGAGGGGGTTCATGCAGAAGATCCTAATCGTAAGGAAAAGGTAGC
TTCATTCCGTAAAGGAGAGATAGCTGTTCTTGTGACAACAACAATACTGGAGCGAGGTGTTACCATCGCTAATTTACAAG
TTGCAGTACTGGGTGCGGAGGAGCCAATTTTTACAGAGAGTGCACTTGTACAAATTGCAGGGCGCGTCGGGCGAAACGCG
TCGTTTCCAAATGGTGATGTCGTGTTGTTTCACTTTGGAAAAACCAAAGCAATGCTAGCAGCCCGCCGTCATATCCAATC
CATGAATCGTGATGCGCGGCAGAATGGGTATTTTGAATGA

Domains

Predicted by InterproScan.

• Helicase conserved C-terminal domain (Helicase_C) (301-399)

• Type III restriction enzyme, res subunit (ResIII) (97-244)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	50.917	99.317	0.506
comFA	Latilactobacillus sakei subsp. sakei 23K	41.542	91.572	0.38