Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   OG707_RS30455 Genome accession   NZ_CP109467
Coordinates   6458708..6459499 (-) Length   263 a.a.
NCBI ID   WP_329123935.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01465     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 6453708..6464499
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG707_RS30440 (OG707_30460) - 6453934..6454665 (+) 732 WP_329123930.1 GNAT family N-acetyltransferase -
  OG707_RS30445 (OG707_30465) - 6454765..6456594 (+) 1830 WP_329123931.1 IucA/IucC family siderophore biosynthesis protein -
  OG707_RS30450 (OG707_30470) - 6456633..6458621 (+) 1989 WP_329123933.1 ATP-dependent DNA helicase -
  OG707_RS30455 (OG707_30475) dinR/lexA 6458708..6459499 (-) 792 WP_329123935.1 transcriptional repressor LexA Regulator
  OG707_RS30460 (OG707_30480) nrdR 6460014..6460526 (+) 513 WP_329123938.1 transcriptional regulator NrdR -
  OG707_RS30465 (OG707_30485) - 6460662..6463538 (+) 2877 WP_329123940.1 vitamin B12-dependent ribonucleotide reductase -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 28282.01 Da        Isoelectric Point: 7.4237

>NTDB_id=676918 OG707_RS30455 WP_329123935.1 6458708..6459499(-) (dinR/lexA) [Streptomyces sp. NBC_01465]
MTTTADSATITAQNRLEPVHAMNDAATNPESTGGAVPSRPARSLPGRPPGIRADSSGLTDRQRRVIEVIRDSVQRRGYPP
SMREIGQAVGLSSTSSVAHQLMALERKGFLRRDPHRPRAYEVRGSDQPSSQPTDTTGKPAASYVPLVGRIAAGGPILAEE
SVEDVFPLPRQLVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLDGEATVKRFKREDGHVWLLPHNS
AYQPIAGDEATILGKVVAVLRRI

Nucleotide


Download         Length: 792 bp        

>NTDB_id=676918 OG707_RS30455 WP_329123935.1 6458708..6459499(-) (dinR/lexA) [Streptomyces sp. NBC_01465]
GTGACCACCACCGCAGACAGTGCCACCATCACTGCCCAGAACCGACTCGAGCCGGTGCATGCCATGAATGACGCAGCCAC
GAACCCTGAATCCACAGGGGGGGCCGTGCCCTCGCGACCTGCGCGCTCGCTGCCCGGCCGACCTCCGGGCATCAGGGCGG
ACAGTTCCGGGCTGACCGACCGGCAGCGGCGGGTCATCGAGGTGATCAGGGACTCCGTGCAACGCCGCGGGTACCCGCCG
TCGATGCGGGAGATCGGCCAGGCCGTGGGCCTGTCGAGCACGTCGTCGGTGGCGCACCAGCTCATGGCGCTGGAGCGCAA
GGGCTTCCTGCGCCGCGACCCGCACCGGCCCCGGGCGTACGAGGTCCGCGGCTCCGACCAGCCCAGCAGCCAGCCCACCG
ACACCACGGGCAAGCCCGCCGCTTCGTACGTCCCGCTCGTCGGGCGCATCGCGGCCGGTGGCCCGATCCTCGCCGAGGAA
TCGGTGGAGGACGTCTTCCCGCTCCCCCGCCAGCTGGTCGGCGACGGCGAACTGTTCGTCCTGAAGGTCGTCGGCGACTC
GATGATCGAAGCCGCGATCTGCGACGGCGACTGGGTCACCGTGCGCCGTCAGCCCGTCGCCGAGAACGGTGACATCGTGG
CGGCCATGCTGGACGGCGAGGCCACGGTCAAGCGCTTCAAGCGCGAGGACGGCCATGTGTGGCTGCTGCCGCACAACTCC
GCGTACCAGCCCATCGCAGGCGACGAGGCCACGATCCTCGGCAAGGTCGTGGCGGTCCTCCGGCGGATCTGA

Domains

Predicted by InterProScan.

Peptidase S24-like (Peptidase_S24)

(145-257)

LexA DNA binding domain (LexA_DNA_bind)

(56-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

46.226

80.608

0.373