Detailed information NTG0676449

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: MRO11_RS12720
• Genome accession: NZ_CP095336
• Coordinates: 2783971..2784972 (-)
• Length: 333 a.a.
• NCBI ID: WP_004394443.1
• Uniprot ID: A0AAW8GWK2
• Organism: Vibrio metschnikovii strain 19GA03SH07
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2778971..2789972

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MRO11_RS12695 (MRO11_12650)	rraA	2779597..2780115 (-)	519	WP_154169966.1	ribonuclease E activity regulator RraA	-
MRO11_RS12700 (MRO11_12655)	-	2780191..2781108 (-)	918	WP_158138979.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
MRO11_RS12705 (MRO11_12660)	hslU	2781195..2782526 (-)	1332	WP_158145001.1	HslU--HslV peptidase ATPase subunit	-
MRO11_RS12710 (MRO11_12665)	hslV	2782565..2783119 (-)	555	WP_004394445.1	ATP-dependent protease subunit HslV	-
MRO11_RS12715 (MRO11_12670)	-	2783308..2783850 (-)	543	WP_332396405.1	SPOR domain-containing protein	-
MRO11_RS12720 (MRO11_12675)	cytR	2783971..2784972 (-)	1002	WP_004394443.1	DNA-binding transcriptional regulator CytR	Regulator
MRO11_RS12725 (MRO11_12680)	priA	2785285..2787486 (-)	2202	WP_154169962.1	primosomal protein N'	-
MRO11_RS12730 (MRO11_12685)	rpmE	2787732..2787950 (+)	219	WP_004394441.1	50S ribosomal protein L31	-
MRO11_RS12735 (MRO11_12690)	-	2788174..2789460 (+)	1287	WP_004394440.1	malic enzyme-like NAD(P)-binding protein	-
MRO11_RS12740 (MRO11_12695)	metJ	2789528..2789845 (-)	318	WP_040903918.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 333 a.a.
• Molecular weight: 36633.26 Da
• Isoelectric Point: 6.6351

>NTDB_id=676449 MRO11_RS12720 WP_004394443.1 2783971..2784972(-) (cytR) [Vibrio metschnikovii strain 19GA03SH07]
MATMKDVAQLAGVSTATVSRALMNPEKVSTTTRKRVEEAVLEAGYSPNSLARNLRRNESKTIVVIVPDICDPYYTEIIRG
IEDVAMEHGYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGADLPFDVSKAEQKNLPPMVMACEYAPELELPTVHIDN
LTSAFEAVNYLTQMGHKKIAQISGPVGAVLCEFRQQGYQQALRRAGLVKNPTYTVVGDFSFESGAKAVRQLLALSEPPSA
IFCHNDAMAIGAMQEAKRLGLRVPQDLSVVGFDDIQFAQYCDPPLTTICQPRYEIGRQTMLMMLELLRGRDVQAGSRLLE
THLVVRSSAAPPR

Nucleotide

• Length: 1002 bp

>NTDB_id=676449 MRO11_RS12720 WP_004394443.1 2783971..2784972(-) (cytR) [Vibrio metschnikovii strain 19GA03SH07]
ATGGCGACAATGAAGGACGTTGCCCAGTTGGCAGGTGTCTCTACCGCGACGGTATCTCGTGCGTTGATGAATCCTGAGAA
AGTATCCACCACCACTCGTAAACGAGTGGAAGAAGCGGTACTTGAAGCTGGCTACTCCCCCAACTCTTTAGCGCGAAATC
TGCGCCGTAATGAATCAAAAACCATTGTGGTGATCGTGCCCGATATTTGTGACCCTTATTACACCGAGATCATTCGTGGT
ATCGAAGATGTGGCGATGGAGCATGGGTATTTGGTGCTGCTGGGTGACAGTGGTCAACAAAAGAAGCGTGAAAGCTCGTT
TGTGAACTTAGTCTTCACCAAGCAAGCCGACGGTATGTTATTGCTTGGTGCTGATCTGCCGTTTGATGTCAGTAAAGCGG
AACAGAAAAATCTGCCACCGATGGTGATGGCCTGTGAATATGCTCCGGAGTTAGAACTGCCGACGGTACATATTGATAAC
CTTACCTCAGCATTTGAGGCGGTGAACTACCTCACTCAGATGGGACATAAAAAAATTGCTCAAATCAGCGGGCCAGTAGG
TGCTGTGTTGTGTGAATTTCGTCAGCAAGGTTACCAGCAAGCACTGCGTAGAGCTGGATTGGTGAAAAACCCAACCTATA
CCGTTGTTGGTGACTTCTCTTTTGAATCCGGTGCTAAAGCGGTACGACAGTTATTAGCACTATCTGAGCCACCAAGTGCG
ATTTTTTGTCATAATGACGCGATGGCGATTGGGGCAATGCAAGAGGCGAAACGCTTAGGTTTACGAGTTCCGCAAGACTT
ATCCGTTGTGGGGTTTGATGATATTCAGTTTGCTCAGTATTGCGATCCACCGTTAACGACGATTTGTCAGCCACGTTATG
AAATTGGCCGACAAACGATGTTGATGATGCTTGAATTACTGCGAGGTCGAGATGTTCAGGCTGGATCACGGTTGTTAGAA
ACTCATCTGGTAGTGAGATCCAGCGCCGCGCCGCCAAGGTAA

Domains

Predicted by InterproScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	88.855	99.7	0.886
cytR	Vibrio parahaemolyticus RIMD 2210633	87.387	100	0.874