Detailed information NTG0676447

Bioinformatically predicted

Overview

• Name: rpoS
• Type: Regulator
• Locus tag: OHA86_RS23695
• Genome accession: NZ_CP109445
• Coordinates: 5571593..5572588 (+)
• Length: 331 a.a.
• NCBI ID: WP_329178298.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01477
• Function: regulation of chitinases (predicted from homology) Competence regulation

Genomic Context

Location: 5566593..5577588

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OHA86_RS23670 (OHA86_23710)	-	5566781..5567425 (+)	645	WP_329182522.1	TetR/AcrR family transcriptional regulator	-
OHA86_RS23675 (OHA86_23715)	-	5567655..5569163 (+)	1509	WP_329178293.1	MFS transporter	-
OHA86_RS23680 (OHA86_23720)	-	5569316..5569930 (-)	615	WP_329178295.1	hypothetical protein	-
OHA86_RS23685 (OHA86_23725)	-	5569951..5570736 (-)	786	WP_329178296.1	class III extradiol ring-cleavage dioxygenase	-
OHA86_RS23690 (OHA86_23730)	-	5570842..5571360 (-)	519	WP_329178297.1	N-acetyltransferase family protein	-
OHA86_RS23695 (OHA86_23735)	rpoS	5571593..5572588 (+)	996	WP_329178298.1	sigma-70 family RNA polymerase sigma factor	Regulator
OHA86_RS23700 (OHA86_23740)	-	5572751..5573497 (+)	747	WP_329178299.1	VIT family protein	-
OHA86_RS23705 (OHA86_23745)	-	5573458..5574219 (-)	762	WP_329178302.1	hypothetical protein	-
OHA86_RS23710 (OHA86_23750)	-	5574401..5575567 (-)	1167	WP_329178304.1	PLP-dependent cysteine synthase family protein	-
OHA86_RS23715 (OHA86_23755)	-	5575681..5575980 (+)	300	WP_329178306.1	hypothetical protein	-
OHA86_RS23720 (OHA86_23760)	-	5576000..5576476 (-)	477	WP_329178308.1	MscL family protein	-
OHA86_RS23725 (OHA86_23765)	-	5576579..5576929 (-)	351	WP_329178311.1	hypothetical protein	-

Sequence

Protein

• Length: 331 a.a.
• Molecular weight: 36631.30 Da
• Isoelectric Point: 4.9649

>NTDB_id=676447 OHA86_RS23695 WP_329178298.1 5571593..5572588(+) (rpoS) [Streptomyces sp. NBC_01477]
MATRAVARRHAGGTSSVRAAGGEVADRDLVGMYLDEIARTPLLDAAREVELSRDIEAGVYAERILAADPDLPAGAGGDIG
REELEALVAAGERAKDIFIRSNLRLVVAVARRYPRSGLPLLDLIQEGNAGLVRAVEKFDYAKGFKFSTYATWWIRQAITR
SIADQSRTIRLPVHLVEELGRIRRVQREFNREHGRDAEPAEIATELASTPERVSDVLDWARDPVSLNMSVDAEGETEFGD
LVEDGAAPSPEDSVLVMLRREELDGLIDRLDDRTASIIRARYGIVDGRERTLTEVGKEHGLTRERIRQIEKHALADLKRM
ARATGLDYEAA

Nucleotide

• Length: 996 bp

>NTDB_id=676447 OHA86_RS23695 WP_329178298.1 5571593..5572588(+) (rpoS) [Streptomyces sp. NBC_01477]
ATGGCAACCCGTGCCGTCGCCCGTCGTCACGCAGGCGGGACCAGCAGCGTTCGCGCCGCAGGCGGGGAAGTAGCCGACCG
CGACCTCGTCGGCATGTACCTGGACGAGATCGCGCGTACGCCGCTGCTCGACGCCGCCCGCGAGGTGGAGCTGTCCCGTG
ACATCGAAGCAGGCGTGTACGCCGAGCGCATCCTCGCCGCCGACCCGGACCTGCCCGCAGGTGCGGGTGGCGACATCGGG
CGCGAAGAGCTCGAGGCCCTGGTGGCCGCAGGTGAGCGCGCCAAGGACATCTTCATCCGTTCCAACCTGCGGCTCGTCGT
GGCCGTGGCCCGCCGGTATCCGCGCAGCGGCCTGCCGCTGCTCGATCTGATCCAGGAGGGGAACGCCGGCCTGGTCCGCG
CCGTCGAGAAGTTCGACTACGCCAAGGGCTTCAAGTTCTCCACCTACGCGACCTGGTGGATCCGCCAGGCCATCACCCGG
TCCATTGCGGACCAGTCCCGCACCATCAGGCTGCCGGTGCACCTGGTCGAGGAACTGGGCCGGATCCGCCGTGTGCAGCG
GGAATTCAACCGCGAGCACGGCCGTGACGCCGAGCCCGCCGAGATCGCCACCGAGCTGGCCTCCACGCCGGAGCGGGTTT
CGGACGTTCTGGACTGGGCACGTGACCCGGTATCGTTGAATATGTCCGTGGACGCCGAGGGAGAGACCGAATTCGGCGAC
CTGGTCGAGGACGGCGCCGCGCCGTCGCCCGAGGACTCGGTGCTGGTGATGCTGCGCCGCGAGGAGCTGGACGGCCTGAT
CGACCGGCTCGACGACCGCACCGCATCCATCATCCGCGCCCGCTACGGCATCGTGGACGGCCGCGAGCGCACCCTCACCG
AGGTCGGCAAGGAACACGGCCTCACCCGTGAGCGCATCCGGCAGATCGAGAAGCACGCCCTCGCCGACCTCAAGCGGATG
GCCCGCGCGACCGGCCTGGACTACGAAGCCGCCTGA

Domains

Predicted by InterProScan.

• Sigma-70 region 2 (Sigma70_r2) (98-167)

• Sigma-70 factor, region 1.2 (Sigma70_r1_2) (28-61)

• Sigma-70, region 4 (Sigma70_r4) (267-318)

• Sigma-70 region 3 (Sigma70_r3) (177-253)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rpoS	Vibrio cholerae O1 biovar El Tor strain E7946	39.604	91.541	0.363