Detailed information NTG0676438

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: MRO11_RS11270
• Genome accession: NZ_CP095336
• Coordinates: 2478372..2481710 (+)
• Length: 1112 a.a.
• NCBI ID: WP_332395790.1
• Uniprot ID: -
• Organism: Vibrio metschnikovii strain 19GA03SH07
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 2473372..2486710

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MRO11_RS11255 (MRO11_11210)	hemL	2474209..2475501 (+)	1293	WP_154170226.1	glutamate-1-semialdehyde 2,1-aminomutase	-
MRO11_RS11260 (MRO11_11215)	-	2475943..2477028 (+)	1086	WP_342639213.1	AI-2E family transporter	-
MRO11_RS11265 (MRO11_11220)	rsmC	2477094..2478116 (+)	1023	WP_170906287.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
MRO11_RS11270 (MRO11_11225)	chiS	2478372..2481710 (+)	3339	WP_332395790.1	response regulator	Regulator
MRO11_RS11275 (MRO11_11230)	-	2482459..2484129 (+)	1671	WP_004394189.1	ABC transporter substrate-binding protein	-
MRO11_RS11280 (MRO11_11235)	-	2484350..2485336 (+)	987	WP_350006946.1	ABC transporter permease	-
MRO11_RS11285 (MRO11_11240)	-	2485339..2486364 (+)	1026	WP_154170222.1	ABC transporter permease	-

Sequence

Protein

• Length: 1112 a.a.
• Molecular weight: 125783.16 Da
• Isoelectric Point: 6.4892

>NTDB_id=676438 MRO11_RS11270 WP_332395790.1 2478372..2481710(+) (chiS) [Vibrio metschnikovii strain 19GA03SH07]
MLAFLAVSLTPLTVTALFFLHSHSKDLQEQSTSHLISVRDTKQQQIIDYLSAKESEVMGFVRSELAYASGGRFYGLVNAF
QRLGENIEQARLHAQQRYIPGSGDQIRTSILPKSSSYAGSERYRLLHKRYHASYLELLKRSDFDDILIVDLQGNVVYSIF
KHAYYGTNLLSDNPQNSPLGRTFQQLEQQVTEQRKVNEDYTPVIVSDFAEYNGRQYAWMGAPIIQQGYLHSYAMFRLPNN
GITKLIADHNQDSAKRTLLVGQDHRSRTLAYQQADVDTSSEVIQLALNGSRSVTTYENTLGEKQIAAYAPIHLQNLNWAL
VVELPEKEAFARVRQLEKLFIFAMLTAIILVVIASHYLSNFITLPLLKLTWAAERVSAGDLDQPIIHTQRRDEIGRLAVS
FERMQRSIREKIQLIKSQNIELEDNIQLIRKQNDELQLANKLKDEFLATTSHELRTPLHGMIGIAEALTSGANGPISAAH
RYQLDIIISSGQRLANLVDDLLDYHKMRYGHLDIETQAVNLSNATRMVLELSHHLLGKKTLRIINQIADQPLWVSADAQR
LEQVLYNLIGNAIKYTSEGKIVISATPMEHQVRVQVVDTGQGIPAEQLEHIFEPLIQAGHDSSRYRQGAGLGLTISRQLI
ELMQGSLYVSSQPMVGTTFSFTLPLATSQQIAQAQRSQIAHFQAPELSSIDDLTQPQQPENPQGPLLLIADDEPVNLRVL
DSFLRLEGYRVRTALDGHEVIEAIAKEKPELLLLDVMMPGMSGYQVCEQLREQYDHAQLPIIMLTALTQSDDRIRGFAAG
ANDYLSKPFNKQELAARIKAHLSASKAEQRRIENAQLQKELKQRAMVEASLLETQGRLLEQLDSAPEAILCLREDNKIRF
ANEAACKLFKRSQDQLKRSNAEELIAPKYLLVEQEHYCGNIDIYIDDVRQHLSADVLRLPEGSSFKTMYIFNVGGNLNAN
RIHQLETAVDALSSYAFAGDKDKLQQLKELGGEFTRIAEKVAGETPSKQALMRAVLVDAMTSALDYWEKVTGQSKFAFAE
QSGLWRVYLDRSTLQTRTLDKYLRIETLPKTPRWRTVLNSLDYILEHCQEQGPERTYIEVQRDKLQQLLTSD

Nucleotide

• Length: 3339 bp

>NTDB_id=676438 MRO11_RS11270 WP_332395790.1 2478372..2481710(+) (chiS) [Vibrio metschnikovii strain 19GA03SH07]
ATGTTAGCGTTTCTGGCAGTCAGCCTCACTCCGCTAACGGTAACAGCCTTGTTCTTTCTTCATTCACACAGTAAAGACTT
ACAAGAACAAAGTACCTCACATCTCATTTCTGTACGAGATACCAAGCAGCAACAAATTATCGATTATCTCAGCGCCAAAG
AGTCTGAAGTGATGGGATTTGTTCGTTCAGAACTTGCCTATGCCAGCGGTGGACGTTTTTACGGTTTGGTTAATGCCTTT
CAACGATTAGGGGAAAATATTGAGCAAGCGCGTCTGCACGCTCAACAACGCTATATCCCCGGTTCTGGCGATCAAATCAG
AACCTCTATTTTACCTAAATCAAGTAGTTACGCAGGTAGTGAACGTTATCGTCTACTGCACAAACGTTACCATGCAAGTT
ATCTAGAGCTACTGAAACGGTCTGACTTTGACGATATTCTGATCGTCGATCTACAGGGTAATGTGGTCTATTCAATTTTC
AAGCATGCGTATTATGGCACGAATCTACTCAGCGATAATCCGCAGAACTCACCTCTCGGACGAACCTTCCAACAACTGGA
ACAGCAAGTGACTGAGCAACGTAAGGTCAATGAAGACTATACCCCTGTCATTGTGTCTGATTTTGCTGAATACAATGGAC
GCCAATATGCTTGGATGGGCGCACCCATTATTCAACAAGGCTATCTTCACAGTTATGCCATGTTCCGTCTGCCGAATAAT
GGCATCACCAAATTAATTGCCGATCATAATCAAGACTCAGCTAAAAGGACATTATTGGTTGGCCAAGATCACCGTTCTCG
TACGCTGGCTTATCAACAAGCCGATGTGGATACCAGCAGTGAAGTGATTCAGTTGGCACTCAATGGCTCGCGCTCGGTCA
CAACCTATGAGAATACTCTCGGTGAAAAACAGATTGCCGCTTATGCGCCGATTCATTTGCAAAATCTCAATTGGGCTTTG
GTTGTCGAACTCCCAGAAAAAGAAGCCTTTGCCCGAGTAAGACAACTGGAAAAATTATTTATTTTCGCGATGTTAACGGC
GATCATCTTAGTAGTCATCGCTTCTCACTATCTCTCTAACTTTATTACTCTCCCTTTACTCAAACTCACTTGGGCAGCAG
AACGCGTCTCCGCCGGTGATTTGGATCAACCGATCATTCATACTCAACGGCGTGATGAAATTGGCCGTTTGGCGGTTAGT
TTTGAAAGAATGCAACGCTCGATCCGTGAAAAAATCCAACTGATCAAATCACAAAATATTGAGTTAGAAGATAATATCCA
GCTGATTCGTAAACAAAATGATGAACTGCAATTAGCCAACAAACTTAAAGATGAGTTTTTAGCGACCACATCACATGAGC
TACGTACTCCATTACACGGCATGATAGGCATTGCCGAAGCTTTGACTTCCGGTGCTAATGGGCCAATCAGCGCAGCCCAC
CGCTATCAACTCGACATTATTATCAGTAGCGGTCAACGTCTTGCCAATCTTGTTGATGATTTACTCGATTATCACAAGAT
GCGTTATGGTCATCTCGATATCGAAACTCAAGCCGTTAATCTCTCCAATGCGACCAGAATGGTACTTGAGCTGTCTCACC
ATTTACTGGGTAAAAAAACGCTACGAATTATTAACCAAATTGCCGATCAGCCATTATGGGTATCGGCTGATGCTCAGCGA
CTTGAACAGGTACTGTATAACCTGATTGGTAATGCGATTAAATATACCTCTGAAGGAAAAATTGTTATTTCAGCTACCCC
AATGGAGCATCAAGTTAGAGTCCAAGTGGTCGATACTGGACAAGGCATTCCTGCTGAGCAATTAGAGCATATTTTTGAAC
CGCTCATTCAAGCCGGGCACGATAGCAGTCGTTATCGTCAAGGTGCGGGTTTAGGATTGACGATTAGCCGCCAATTAATT
GAATTAATGCAAGGCTCCTTGTACGTCAGTAGCCAGCCGATGGTCGGCACAACCTTTAGTTTTACGCTGCCACTCGCGAC
TTCACAACAAATTGCTCAAGCGCAGCGCAGTCAAATTGCTCATTTTCAAGCACCGGAATTATCCTCGATTGACGATCTCA
CTCAACCGCAACAACCAGAAAACCCACAAGGTCCTCTACTGCTGATTGCCGATGATGAGCCGGTTAACCTGCGTGTATTA
GACAGTTTTTTACGTCTAGAGGGCTATCGTGTCCGAACAGCACTTGATGGCCATGAGGTTATTGAAGCAATTGCCAAAGA
GAAACCTGAACTGTTACTGCTCGATGTGATGATGCCCGGCATGAGTGGTTATCAGGTCTGTGAGCAATTAAGAGAGCAGT
ACGATCATGCGCAACTACCTATTATAATGCTAACCGCATTAACCCAAAGTGATGATCGGATCAGAGGCTTTGCCGCTGGC
GCCAATGACTATTTATCAAAACCTTTTAATAAACAAGAACTCGCCGCTCGAATTAAAGCTCACTTAAGCGCCAGTAAAGC
AGAGCAACGCCGTATTGAAAATGCTCAACTTCAAAAAGAGCTCAAACAACGAGCGATGGTCGAAGCCAGTTTACTCGAAA
CTCAAGGCCGACTATTAGAGCAACTGGATTCAGCGCCAGAAGCGATTTTGTGTTTACGAGAAGACAATAAAATCCGCTTT
GCCAATGAGGCGGCCTGTAAGCTATTTAAACGCAGCCAAGATCAACTCAAACGCTCTAACGCCGAAGAGTTGATTGCCCC
TAAATATTTACTGGTTGAGCAAGAGCATTATTGCGGGAACATCGATATTTATATCGATGATGTCAGACAACACCTCTCCG
CTGATGTGCTTCGCTTACCGGAAGGAAGCAGTTTTAAAACGATGTACATTTTTAATGTCGGTGGAAATCTTAACGCCAAT
CGTATCCATCAACTGGAAACCGCCGTCGACGCGTTATCAAGCTATGCTTTTGCTGGTGATAAAGACAAACTTCAGCAGTT
AAAAGAGCTAGGAGGTGAATTTACTCGCATCGCAGAAAAAGTGGCCGGAGAAACCCCATCAAAACAGGCGTTAATGCGCG
CCGTGTTGGTTGATGCGATGACGAGCGCTCTCGACTACTGGGAAAAAGTCACAGGACAAAGTAAGTTTGCTTTTGCTGAA
CAAAGTGGATTATGGCGCGTCTATTTAGATCGTAGTACTTTGCAAACTCGAACGTTGGATAAGTACTTACGTATTGAAAC
GCTACCCAAAACGCCTCGCTGGCGCACGGTGCTGAACTCACTTGACTACATATTGGAACACTGTCAGGAGCAAGGCCCAG
AGCGAACCTACATCGAAGTACAACGAGATAAATTACAGCAATTGTTAACGAGCGATTAA

Domains

Predicted by InterproScan.

• His Kinase A (phospho-acceptor) domain (HisKA) (443-508)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (557-666)

• PAS fold (PAS) (860-908)

• Response regulator receiver domain (Response_reg) (708-819)

• HAMP domain (HAMP) (358-410)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	80.306	100	0.803